Effector profile
| PlantPEAD ID: PlantPEAD04221 | Uniprot ID: A0A1X1CU16 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1076550 | Pathogen type: Bacteria |
| Species: Pantoea rwandensis | Strain: LMG 26275 | Other name: |
| Gene name: HofQ | NCBI Gene ID: MLFR01000020 | |
| Entry name: A0A1X1CU16_9GAMM | Protein name: DNA transporter HofQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTGAGTTTGGTATTTGATGATGCGCCAGTCGAACGTATTTTGCAGGCACTGGCAGATTATCAGCAAACCAATTTGCTGATTGCGCCGGGTGTAGAAGGGCGGCTTTCGCTACGCCTTGATGAGATTGATGGCGAGCGGGCATTGGCACTGGTGGCGCGGCTGGCAAAGCTCACGCTAATACAGGAGGAGGGCGTACTTCTGGTCTATCCAGAAAGCTGGCAGCAAATGCAGGCGCTGCAATCTAAAGCTGAAAATGAGGAGAGGGAGCAGCAGGTGCCGCTTGAGCAATACCGGGTGACGCTGCATTACGCCACAGCCAGCGATGTCTATCGCAGTTTGCAGACCGAACGTTCCTTGCTTACGGCGCGCGGAAGCGTGACAGTCGATAGCCGAACTAACAGTTTGCTACTGCGTGACACGGCTAAAGCGTTGCGCGATACCACGCGCTGGCTCACTGCGCTGGACAGGCCGCTTGAGCAAGTTGAGCTTTCAGCACACATCATTACTATTCACGAAGAGCATCTTCGCGAACTAGGTGTTAACTGGAGCACTTCTCCTGCGCAAAACGTGACCGCTGCGCTGCGCAATCCGCAGTTGGCGATCCCCCTAACGGTGGAGAATCCAGCCCTGCGTGCGGGGGTGACGCTGGGGAAGCTCAGTGGTGAGTTGCTCAATCTTGAACTCAGTGCACTGGAGCAGGAGAACCAGATCGAAATCATCGCCAGCCCGCGCTTGTTTACCTCCAATCAGCAGACCGCCTCCATTAAGCAAGGCACCGAAATCCCTTATGAGGTGAAATCAGGCAGCAGCGGCGCGACAGCGATTGAATTCAAAGAAGCCGTACTGGGGATGGAAGTCACGCCTGTCGTGCTAGGCAATGGGCGTATCCAGCTCAAGTTGCGACTCAGCCAAAATATGCCAGGACGCAGCTTAAGCGTGGGCGAGAATAAGGTTCTGAGTATCGATAAACAGGAAATAGAAACTCAGGTCACGCTGCGTGATGGGGAAACCCTGGCTCTGGGCGGCATTTTCCAGCAGCAGCGCACGCAGGGTGAAAAACGCGTTCCGTGGTTAGGCGAAGTTCCTTTGTTGGGAAATTTGTTCCGACACCAAACGGAAGAGCAAAAAAAGAAAGAGTTGGTGATCTTTATTACCCCTCGACTGGTCAGGGAAGCAGCGCTTACGGGTGGATAA
Protein sequence:
MSLVFDDAPVERILQALADYQQTNLLIAPGVEGRLSLRLDEIDGERALALVARLAKLTLIQEEGVLLVYPESWQQMQALQSKAENEEREQQVPLEQYRVTLHYATASDVYRSLQTERSLLTARGSVTVDSRTNSLLLRDTAKALRDTTRWLTALDRPLEQVELSAHIITIHEEHLRELGVNWSTSPAQNVTAALRNPQLAIPLTVENPALRAGVTLGKLSGELLNLELSALEQENQIEIIASPRLFTSNQQTASIKQGTEIPYEVKSGSSGATAIEFKEAVLGMEVTPVVLGNGRIQLKLRLSQNMPGRSLSVGENKVLSIDKQEIETQVTLRDGETLALGGIFQQQRTQGEKRVPWLGEVPLLGNLFRHQTEEQKKKELVIFITPRLVREAALTGG
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 44053.2 | 397 | 5.35 | -0.249 | 46.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR013355,IPR004846,IPR004845
Pfam: PF00263,PF03958
SMART:
KEGG:
PRINTS: PR00811,PR01032