Effector profile
| PlantPEAD ID: PlantPEAD04226 | Uniprot ID: A0A328TQ29 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 252393 | Pathogen type: Bacteria |
| Species: Candidatus Erwinia dacicola | Strain: Oroville | Other name: |
| Gene name: | NCBI Gene ID: LJAM02000016 | |
| Entry name: A0A328TQ29_9GAMM | Protein name: Bacterial type II and III secretion system family protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTAACCGTCCTTCAGGACCTGCGTGTCGATCTCCTGCTTATCGATGGTGAGCACCTCATTAACGCCGCTGCACATGTTGCGTTCAGGCATATTTTGCAAAATGTGCAGTTTCAGCAAAATCCGACCATTGGCCTGCACCACCGGCGTCACTTCCATTCCCAGCATCGCTTCTTTAAATTCCATGGTGGTGGAGCCGCTGCTGCCGGTCGCCACCTGCTCTTCTTCGCTTAGCCCCCAGTTCAC
Protein sequence:
MNWGLSEEEQVATGSSGSTTMEFKEAMLGMEVTPVVQANGRILLKLHILQNMPERNMCSGVNEVLTIDKQEIDTQVLKDG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 8823.09 | 80 | 4.51 | -0.25 | 41.6 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004846
Pfam: PF00263
SMART:
KEGG:
PRINTS: