Effector profile
| PlantPEAD ID: PlantPEAD04227 | Uniprot ID: A0A328TTF6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 252393 | Pathogen type: Bacteria |
| Species: Candidatus Erwinia dacicola | Strain: Oroville | Other name: |
| Gene name: | NCBI Gene ID: LJAM02000016 | |
| Entry name: A0A328TTF6_9GAMM | Protein name: Putative transport hofQ domain protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTATCCAGCGTAATGCTGCCGCGCGCCGTCATTAGCTGGGCGCGCTGCGTTGACCGCTGCCGCATCCGCATGCTGCAACGTCAGTGTCAGGTTGTGCAGCGGCAGATTTTGCTGTTGTTCCTCACGTCGGGCATAGGCTTTGCGCTGCTCCTTCTGCTGCCAGCTTTCGGGATAGACCAGCAGCACGTTGGCATGCTGCTGCGTTGTCAACCGCCCCATTTTCATCACCAGAGACAGCGCCTGCTGCCACGGCACGCCTTTCAACCGCAGCGAGAGGTTGCCCTCCACCCCGGGTGCCACCACCAGATTCAGCTGCTGATAGTCCGCCAGCGCCTGTAACACTTGGCCGATGGGCGCTTCATCGAACGCCAGTGAGAGTAGGCTGATCAGTGCTAGCCAGAGATAGAGCAT
Protein sequence:
MLYLWLALISLLSLAFDEAPIGQVLQALADYQQLNLVVAPGVEGNLSLRLKGVPWQQALSLVMKMGRLTTQQHANVLLVYPESWQQKEQRKAYARREEQQQNLPLHNLTLTLQHADAAAVNAARPANDGARQHYAG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15178.4 | 136 | 8.08 | -0.17 | 56.38 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR011662
Pfam:
SMART: SM00965
KEGG:
PRINTS: