Effector profile
| PlantPEAD ID: PlantPEAD04230 | Uniprot ID: A0A358L941 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 558 | Pathogen type: Bacteria |
| Species: Erwinia citreus | Strain: UBA8792 | Other name: |
| Gene name: | NCBI Gene ID: DOOK01000407 | |
| Entry name: A0A358L941_ERWCI | Protein name: DNA uptake porin HofQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTACTCGTCACGAATCAGTCTTGGGGTGATGAAGATCACCAGCTCCCGCTTTTTTTGGCTGGTAGAGGCATGGCGAAAAAGCGCGCCCAACAGCGGCACAGAGCCAAGAAGCGGCACCTGGCTCTGCCCTTTTGCACGCTGCTGCTGGAAAATCCCCCCCAGCGCCAGCGTCTCGCCATCTTTCAGGGTAACCTGAGTCTGGATCTCCTGCTTATCGATAGCGATATATTCTCCTTCTCCGCTACGTATCATGCTGCCGGGCAAATTTTGGCTGATATGCAGCTTTAACAGGATACGGCCATTCGGCTGCACATAAGGCGTAACGTCCATGCCTAATACGGCCTCTCGGAACTCCACGCTGGTTTTACCGTTGCTGCCGCTGGAGACCTCATAGGGAATTTCAGTTCCCTGTTTGATGCTGGCGGGCTGCTGATGCGAGGTAAACAGGCGGGGACTGGCGATAATCTCCAGCTTGTTTTCCTGTTCCAGCGCGCTCAGTTCCAGATCCAGCATCCTGCCATTCAGACGCGCCAGGGTGAAGCCAGCAGCCAGCGCGGGGCTGGCCACCGGCAGATCGACCCGCAACTGGCTGACTCGCAGCGCGTGGGCAATCTGCTCTTCCCCGCCCAGCCCCCAACGTACTCCCAGCTCGCTCAGGCTTTCTTCGCTGAGCGTCACAATATGCGCAGCAAGTTCGACCTGCTCCAGCGGCGTGTCCACCGCCATGACCCAGCGCTGTACCTCGTCCAGCGCGACCCGGGTATCTCGCAGGATCAGGCTGTTAGTGCGTTTATCAACCGTCACGCTGCCGCGAGCGCTCAGCAGTTTGCCCTGTGCAGCCTGCAGGCTGCCGTAAACTTTTTCCGCATCCGCATAGCGCAGCGGCAATGCCCGCGTATCAAGCGGCAGCGCATTTTCTGCTTTTTCCCGCTCAAGCGTCTGCTGCCGCTGTTTTTCTTCCTGCCAGCTCGGCGGGAAAACCAGCAGTACATTGCCCTCTTGATTCACGCTCAGCTTTGCCAGACGGGACACCAGCGACAGCGCCTGCTGCCAGCTGACCTCTTTTAAGCGAATGGAAAGCCGTCCCTCAACGCCGGGCGCGACCAGCAAATTCAGCTGCTGATAGTCAGCCAGCGCCTGGAGGATTTGCCCGACGGGTGCGTCATCGAACGCCAGGGAAAGCGGGGCCGGGTTGCCCCGCAG
Protein sequence:
MRGNPAPLSLAFDDAPVGQILQALADYQQLNLLVAPGVEGRLSIRLKEVSWQQALSLVSRLAKLSVNQEGNVLLVFPPSWQEEKQRQQTLEREKAENALPLDTRALPLRYADAEKVYGSLQAAQGKLLSARGSVTVDKRTNSLILRDTRVALDEVQRWVMAVDTPLEQVELAAHIVTLSEESLSELGVRWGLGGEEQIAHALRVSQLRVDLPVASPALAAGFTLARLNGRMLDLELSALEQENKLEIIASPRLFTSHQQPASIKQGTEIPYEVSSGSNGKTSVEFREAVLGMDVTPYVQPNGRILLKLHISQNLPGSMIRSGEGEYIAIDKQEIQTQVTLKDGETLALGGIFQQQRAKGQSQVPLLGSVPLLGALFRHASTSQKKRELVIFITPRLIRDE
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 43930.3 | 400 | 6.07 | -0.176 | 41.34 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR013355,IPR011662,IPR004846,IPR004845
Pfam: PF00263,PF03958
SMART: SM00965
KEGG:
PRINTS: PR00811,PR01032