Effector profile
PlantPEAD ID: PlantPEAD04237 Uniprot ID: A0A419AY40 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 554 Pathogen type: Bacteria
Species: Pectobacterium carotovorum Strain: S1.15.11.2D Other name: Erwinia carotovora
Gene name: HofQ NCBI Gene ID: QZDH01000013
Entry name: A0A419AY40_PECCA Protein name: DNA uptake porin HofQ
DOI:
Gene/Protein information
Gene sequence:
TCACGATGATGCGGGTATCAGCGTCGGCGTAATGAAAATGACCAATTCTCGTCGCGTATGCTGCTGAGTATGGTTTCTGAACAGATGACCAAATACGGGAACCTCGCCCAATATGGGTACCTGTCTGTCGCTGTTCTTTTTTTGCTGCTGGAAAATGCCGCCTAAAACGATGGTTTCTCCATCAGCGACCGTCACCTGGGTTTGGATTTCCTGTTTATCGATCGCTAATGCTTCGCCATTATCGCCTTGCTTAATCGTCTGCCCCGGCATGTTTTGGCTGATTTTCAGGTTCAGCGTAATCCGTCCGGCACGCAGAATATCCGGCGTGACTTCCATCCCTAATACCGCCTCCTTGAACTCGATAGACGTCGATCCGCTGGCTCCGCTGGAGACCTGATACGGAATTTCCGTGCCTTGTTTAATACTGGCGGTCTGCTGGTGCGCGGTAAACAAGCGAGGGCTGGCGATAATCTCGACCTGACTTTCCTGTTCCAGCGCCATTAATTCCAGGTCCAGCAGGCGACCATTCAAGCGCGCCAAATGGAATCCGGCATTGATCGCGGGCGTATCGACTGGCAGGCCGACGTTAAAATTATTCAGCCTGAGTGCCTTGTTCGCCGCGTCCCCTTCACCCAGTCCCCAATTCACGCCCAGCGCCTGCAGGTGCTCGCTACTGATGGTGACGATATGCGCCGCCAGCTGTACCTGCGCTAGTGGCAGATCGAGCTCTTTCACCCACGGTTCGAGCTGTGCCAGAGCCTCTTCCGTATCGCGGATCAATAGGGTATTCGTCCGCTTATCCACGGTTACGCTGCCCCTCGTAGAGAGTAGCGTTCCACGCTGAGCTTGAACGCTGGCCGCCACTTCCGCCGCATCAGCATATTGCAATGCAACAGAGATATTATGCAGCGGCAATTTCTGCGCCTGCTCCGCCGCCTGTTCGTCTCGTTCTTTCTGCAAGGACTCAAGGTGCCCAGCAGGGAAAACCATCAGCACGTTGCCGTTCCGCTCGACGCTGAGCTTCCCCATGCGTAAAACAATATCCAATGCCTGCTGCCAGGGAATATCAGCCAGCCTTAGGCTAAGGTTCCCCGTCACGCCCGGGGCGATCACCACATTGAGCTGTTGGTGATCGGCTAACGCCTGTAGCACCCGAGGTATCGGTGAATCTTCAAACGCCATCGATACCGAACTTTCCGCACTGGCCTGAAACGGCGCGGCGAGAAGAAGTAACCCACTCCACGCCAGCATCCGACATAACATCCTCATATTCAT
Protein sequence:
MNMRMLCRMLAWSGLLLLAAPFQASAESSVSMAFEDSPIPRVLQALADHQQLNVVIAPGVTGNLSLRLADIPWQQALDIVLRMGKLSVERNGNVLMVFPAGHLESLQKERDEQAAEQAQKLPLHNISVALQYADAAEVAASVQAQRGTLLSTRGSVTVDKRTNTLLIRDTEEALAQLEPWVKELDLPLAQVQLAAHIVTISSEHLQALGVNWGLGEGDAANKALRLNNFNVGLPVDTPAINAGFHLARLNGRLLDLELMALEQESQVEIIASPRLFTAHQQTASIKQGTEIPYQVSSGASGSTSIEFKEAVLGMEVTPDILRAGRITLNLKISQNMPGQTIKQGDNGEALAIDKQEIQTQVTVADGETIVLGGIFQQQKKNSDRQVPILGEVPVFGHLFRNHTQQHTRRELVIFITPTLIPASS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
46092.8 424 5.53 -0.038 34.6
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.