Effector profile
| PlantPEAD ID: PlantPEAD04255 | Uniprot ID: B2VJW9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 338565 | Pathogen type: Bacteria |
| Species: Erwinia tasmaniensis | Strain: strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99 | Other name: |
| Gene name: HofQ | NCBI Gene ID: CU468135 | |
| Entry name: B2VJW9_ERWT9 | Protein name: Type II secretion system protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAATCACTACGGATGAGACGCGGCGTGATAAAGATCACCAGTTCGCGTCTTTTTTGCTGGCGAACATCGTGGCGAAACAGGGCGCCCAGTAGAGGGATATCCCCCAGCCAGGGAACTTTTGTCCTGCCGGATTCGCTCTGCTGCTGAAATATTCCGCCCAACGCCAGCGTCTGACCATCCTTCAGTATCACCTGCGTGTCAATCTCCTGCTTATCAATAGTCAGTACCTCATTCTCCCCACTACGCATATTGCGCCCAGGGACATTCTGAGAAATATGCAGTTTTAGTAGGATCCGTCCGTTGGGCTGTACCACAGGCGTCACCTCCATTCCCAGCATTGCCTCCTTGAACTCCATCGTGGTAGAGCCGCTGTTACCGGTTGATACTTCGTATGGAATTTCAGTACCTTGCTTAATACTTGCCGTCTGCTGATGTGAAGTAAAAAGCCTCGGACTGGCGATAATATCGGCCTGGTGCTCACTCTCTAAAGCGCTCAATTCCAGCGCTAACAGGCGACCATCCAGTTTTGCCAGGGTAAAACCGGCAACCCCGGCAGGCCGGCCCGTGGCGAGTTCCACACGCAGCTGGCTGGTGCGCAGCGCATCAGACACCTGTGCTTCGCCGCTCATTCCCCAGGTTACCCCCATCTCACGAAGGCTCTCTTCACTGATGGTAACAATCTGCGCCGCCAGCTCGATTTGCGCCAACGGCACATCCAGTTGACGTATCCAGCGTTCGGTTTGCGTGAGCGCTTTCTCGGTATCGCGCAGCAAAAGGCTGTTGGTACGGCTGTCCAAAGTGACGCTGCCGCGCGCCGACATTAATCTTGTACGCTCGTTTTGTAAGCTGGTATTGACCGCTGCTGCATCTGCATGTACCAGCGTCAGGCTCCGATTAAATAGCGGCAGCATCTGTTCCTGTGCTTCCAGCCGGGCTGCCGTTTTGCGTTGCTCCTCCTGTTGCCAGCCTTCGGGAAATGCCAGTAACACATTTTCCTGCTGTTCCATATCGAGCTTGCCGAGCTTGGCCACCAGCCGCAGTGCCTGCCGCCAGGAAACATCTTTTAGCCGCAAGGAAAGTGTGCCTTTTACGCCAGGAGCCACCATCAGGTTAAGCTGCTGGTAGTCTGCCAATGCCTGTAGTACCTGGGCCAC
Protein sequence:
MAQVLQALADYQQLNLMVAPGVKGTLSLRLKDVSWRQALRLVAKLGKLDMEQQENVLLAFPEGWQQEEQRKTAARLEAQEQMLPLFNRSLTLVHADAAAVNTSLQNERTRLMSARGSVTLDSRTNSLLLRDTEKALTQTERWIRQLDVPLAQIELAAQIVTISEESLREMGVTWGMSGEAQVSDALRTSQLRVELATGRPAGVAGFTLAKLDGRLLALELSALESEHQADIIASPRLFTSHQQTASIKQGTEIPYEVSTGNSGSTTMEFKEAMLGMEVTPVVQPNGRILLKLHISQNVPGRNMRSGENEVLTIDKQEIDTQVILKDGQTLALGGIFQQQSESGRTKVPWLGDIPLLGALFRHDVRQQKRRELVIFITPRLIRSD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42628.8 | 384 | 6.29 | -0.251 | 44.69 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR004846,IPR004845
Pfam: PF00263,PF03958
SMART:
KEGG: eta:ETA_32070
PRINTS: PR00811,PR01032