Effector profile
| PlantPEAD ID: PlantPEAD04260 | Uniprot ID: Q6CZQ7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 218491 | Pathogen type: Bacteria |
| Species: Pectobacterium atrosepticum | Strain: strain SCRI 1043 / ATCC BAA-672 | Other name: Erwinia carotovora subsp. atroseptica |
| Gene name: HofQ | NCBI Gene ID: BX950851 | |
| Entry name: Q6CZQ7_PECAS | Protein name: Type II secretion system protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATAATGATGCAGGGATCAACGTCGGTGTAATGAAAATGACCAATTCTCGTCGCGTGTGCTGCTGAGTATGGTTTCTGAACAGATGACCAAATACGGGAATCTCACTCAATATTGGCACCTGTCTGTCGCTATTCTTTTTTTGTTGCTGGAAAATGCCGCCTAATACGATGGTTTCTCCATCAGCGACCGTCACCTGAGTTTGGATTTCCTGTTTATCGATCGCTAACGCTTCGCCATTATCACCTTGCTTAATCGTCTGCCCCGGCATGTTTTGACTAATTTTCAGGTTCAGCGTAATACGCCCAGCACGCAGAATATCAGGCGTGACTTCCATGCCTAATACCGCCTCTTTGAATTCGATAGACGTCGACCCGCTGGCACCGCTGGATACCTGATACGGAATTTCCGTTCCTTGTTTAATGCTAGCGGTTTGCTGATGTGCGGTAAAAAGTCGAGGACTGGCGATAATTTCGACCTCACTTTCCTGCTCCAGCGCCATTAATTCCAGATCCAGCAAGCGACCGTTCAGCCGCGCCAGATGGAACCCGGCATTGATCGCTGGCATATCCACCGGCAAGCCAACATTAAAATTATTCAGCCTGAGCGCTTTGTTCGCCGCGTCCCCCTCGCCCAACCCCCAGTTAACACCCAATGCCTGCAGGTGCTCACTGCTGATGGTGACAATATGCGCCGCCAGTTGTACCTGCGCTAACGGCAGATCGAGCTCTTTCGCCCACGGTTCAAGCTGTGACAGAGCCTCTTCCGTATCGCGAATCAATAAGGTATTCGTCCGTTTATCCACGGTTACGCTGCCACGCGTAGAAAGCAGCGTCCCACGTTGCGCCTGAACGCTGGCTGCAACCTCCGTGGCATCAGCGTACTGTAAGGCAACAGAAAGATTATGCAGCGGCAATTTCTGTGCCTGCTCTGCTATGCGCTCATCCCGTTCCTTCTGCAAGGACTCAAGATGATCTGCAGGGAAAACCAGCAGCACGTTACCGTTGCGCTCTACGCTAAGTTTTCCCATACGTAAAACAATATCCAGCGCTTGCTGCCAGGGAATATCTGCCAGTCTCAGGCTTAGATTCCCTGTCACACCCGGTGCGATCACCACATTGAGCTGCTGGTGATCGGCTAAGGCCTGTAACACGCGAGATATCGGTGAGTCCTCAAATGCCAT
Protein sequence:
MAFEDSPISRVLQALADHQQLNVVIAPGVTGNLSLRLADIPWQQALDIVLRMGKLSVERNGNVLLVFPADHLESLQKERDERIAEQAQKLPLHNLSVALQYADATEVAASVQAQRGTLLSTRGSVTVDKRTNTLLIRDTEEALSQLEPWAKELDLPLAQVQLAAHIVTISSEHLQALGVNWGLGEGDAANKALRLNNFNVGLPVDMPAINAGFHLARLNGRLLDLELMALEQESEVEIIASPRLFTAHQQTASIKQGTEIPYQVSSGASGSTSIEFKEAVLGMEVTPDILRAGRITLNLKISQNMPGQTIKQGDNGEALAIDKQEIQTQVTVADGETIVLGGIFQQQKKNSDRQVPILSEIPVFGHLFRNHTQQHTRRELVIFITPTLIPASL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42944 | 393 | 5.35 | -0.098 | 36.4 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR013355,IPR011662,IPR004846,IPR004845
Pfam: PF00263,PF03958
SMART: SM00965
KEGG: eca:ECA4094
PRINTS: PR00811,PR01032