Effector profile
| PlantPEAD ID: PlantPEAD04778 | Uniprot ID: B0RCU7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 28447 | Pathogen type: Bacteria |
| Species: Clavibacter michiganensis | Strain: subsp. sepedonicus strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1 | Other name: |
| Gene name: | NCBI Gene ID: AM849034 | |
| Entry name: B0RCU7_CLAMS | Protein name: Hydroxylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATCGTCGGGATTCCTCTCGGATGTGCGCGGTCTCGGGGCGTGAGGTGACGGGTAGGGCGGGGGGCCGGCCGAGGAGGGCCGGGAGGACGGGTGTCGTCCCCGGCAGCGCGGGGTCGCTGGTCTCCTCCTGGTGAGCGGGCAACCAGGAGGCGAAGGACGGGGGGACCCCGTTGCGGAGGAGCACCTGCTCGAACGCGCCCGGGTCGAGCCGCTCGTGGCGGATCTCCCGGCCGATGTCCGCGGACAGCGCGGCGGCGACGTCGGCCATCGGCACCTGGACGGGTCCGGTCACGTCGAAGGCGCGGCCCGCCCGCGCCACGGCCTCCCGTCCCGCGGCGCACGCGGCCTCGGCGAGGTCGGGGAGCGCGATCCAGGCGACCCCTGCGTCATGGATGGAGGAGAGCAGAACCCCGCCGAGCTCGGCCCAGTAGCGGTACGAGTCGAGGCTCTCCTCGAGGGGCGCGCAGCGGAGGAGCACGGCATGGTCGAGGTCCGCCAGCAGCCTCGCCTCGGCCTCTCCCCGCGCGTCACCCACGTCGACGCGTCGGCTCGAGACGACGACCGTAAGACGGCCGGCCTCGAGCGCCCGGGACCGGATGCGGCGATCGCCGGGATCCATGGCCACGAGGTCGATGACGCGCGTCGCCGGGTCGCACACGGCCGGCGCCGTCACCGCGAGCGCGGCGAGCGCATCGCGGAACCCGTCGCGGTTGCCGACGTACCTCAT
Protein sequence:
MRYVGNRDGFRDALAALAVTAPAVCDPATRVIDLVAMDPGDRRIRSRALEAGRLTVVVSSRRVDVGDARGEAEARLLADLDHAVLLRCAPLEESLDSYRYWAELGGVLLSSIHDAGVAWIALPDLAEAACAAGREAVARAGRAFDVTGPVQVPMADVAAALSADIGREIRHERLDPGAFEQVLLRNGVPPSFASWLPAHQEETSDPALPGTTPVLPALLGRPPALPVTSRPETAHIREESRR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25810.3 | 242 | 5.31 | -0.04 | 50.31 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036291
Pfam:
SMART:
KEGG: cms:CMS2967
PRINTS: