Effector profile
| PlantPEAD ID: PlantPEAD05091 | Uniprot ID: W6YMB2 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 101162 | Pathogen type: Fungi |
| Species: Bipolaris oryzae | Strain: ATCC 44560 | Other name: |
| Gene name: | NCBI Gene ID: KI964168 | |
| Entry name: W6YMB2_COCMI | Protein name: Endo-beta-1,4-glucanase D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGATTCTACTAGCCATCAGCCTCATCGGGCAATTATCCTACCTCACTCAAGCGCACTACCACTTCCCTCACTTTGTAATCAATGGCCAAGTTACTGGTGCACACGAGTATGTCCGCGAGCACGATAACGGTTTCCAGCCTTCATGGGACGAGGGCAGATTCATTAACAGCGAAGATCTCCGCTGCAATAAGGGTTCCATGAATCACCGCACTCAACCGAAGACTTACAAAGTCAAGGCAGGCCAAGATGTCATTGGTTTCCAAGCATATATCAATACGGAATTATTCCATCCAGGCCCTGTTCAGATTTATCTCTCGAAAGCGCCCGGCGATATTCGCGACTACGATGGATCCGGCGATTGGTTCAAAGTATATCAGCTTGGGCATCAGCCTGGCTCGACGGCTGACTCCGCATGGCTGTCATGGCATAAGAAGCAGTTCACTTTCAAGCTCCCTGCCGAGATCCCAGCAGGCCAATACCTGATGCGAATCGAGCAGATCACCACTCATCCTCCCTACACAAACCGCGAGTTTTACATCCAATGTGCACACATCGAGATTGCCAGCAGTTATAACGGCTCTCCCTCACCTACATTCAAGATACCGGGTGTATACAACCGCACGCAGCCGTTCTTCAAATATGACAGTTGGGCAAAGCCACAGCCGACCGTTTGCCCGCTCCCTGGACCCGCGATGTGGCCAAACAATAACAACTTGAACAAGATCCTTTGA
Protein sequence:
MKILLAISLIGQLSYLTQAHYHFPHFVINGQVTGAHEYVREHDNGFQPSWDEGRFINSEDLRCNKGSMNHRTQPKTYKVKAGQDVIGFQAYINTELFHPGPVQIYLSKAPGDIRDYDGSGDWFKVYQLGHQPGSTADSAWLSWHKKQFTFKLPAEIPAGQYLMRIEQITTHPPYTNREFYIQCAHIEIASSYNGSPSPTFKIPGVYNRTQPFFKYDSWAKPQPTVCPLPGPAMWPNNNNLNKIL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 27875.5 | 244 | 8.63 | -0.552 | 39.92 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005103
Pfam: PF03443
SMART:
KEGG: bor:COCMIDRAFT_108907
PRINTS: