Effector profile
| PlantPEAD ID: PlantPEAD05318 | Uniprot ID: C6CEJ4 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 556 | Pathogen type: Bacteria |
| Species: Dickeya chrysanthemi | Strain: strain Ech1591 | Other name: Pectobacterium chrysanthemi,Erwinia chrysanthemi |
| Gene name: | NCBI Gene ID: CP001655 | |
| Entry name: C6CEJ4_DICC1 | Protein name: UPF0234 protein Dd1591_3079 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAATCGCGGAAGTTATTGAACTGAAAGGGCTGCCCCAGGTCAGCACCGCGCACCAGCGAAATCACGCCTTGCAGGTCATCGCGGGATTTCCCGGTAACGCGTACCTGTTCCCCCTGAATCTGGGCCTGAACCTTGAGCTTGCTGTCTTTAATCAGTTTAACGATTTTCTTCGCCAGCGTGGTTTCAATGCCTTGTTTCAGCTTCGCTTCCACACTGTAGGTTTTACCGCTGTGCTCCATTTCTTCAGGGATTTCCAGCGAGCCGCCTTCAATGCCACGTTTCGCCAGTTTTTCCCTAATAATTTCAATTAATTGCTTAACCTGAAAATCTGATTCGCTGGTCGCCTTGATGGTTTGTGCTTTTTCATTCAGCTCAAAGCTGGCAGGCACATTACGAAAATCCCAACGGGTATCCAGTTCACGGGTCGCGTTTTCCACCGCATTGCGGACTTCCTGCATGTCGATTTCCGAAACGATATCGAAAGATGGCAT
Protein sequence:
MPSFDIVSEIDMQEVRNAVENATRELDTRWDFRNVPASFELNEKAQTIKATSESDFQVKQLIEIIREKLAKRGIEGGSLEIPEEMEHSGKTYSVEAKLKQGIETTLAKKIVKLIKDSKLKVQAQIQGEQVRVTGKSRDDLQGVISLVRGADLGQPFQFNNFRD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18435.9 | 163 | 5.62 | -0.573 | 37.43 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR007551,IPR035571,IPR035570,IPR036183
Pfam: PF04461
SMART:
KEGG: dze:Dd1591_3079
PRINTS: