Effector profile
PlantPEAD ID: PlantPEAD05319 | Uniprot ID: E0SD53 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 204038 | Pathogen type: Bacteria |
Species: Dickeya dadantii | Strain: strain 3937 | Other name: |
Gene name: YajQ | NCBI Gene ID: CP002038 | |
Entry name: E0SD53_DICD3 | Protein name: UPF0234 protein Dda3937_01966 | |
DOI: |
Gene/Protein information
Gene sequence:
ATGCCATCTTTCGATATTGTTTCGGAAATCGATATGCAGGAAGTCCTCAATGCGGTGGAAAACGCCACCCGCGAGCTGGGCACCCGCTGGGACTTTCGTAATGTGCCGGCCAGCTTTGAGCTGAATGAAAAAGCACAAACGATCAAAGCGGCCAGCGAATCTGATTTTCAGGTTAAGCAATTAATTGAAATTCTGCGGGAAAAGCTGGCAAAACGCGGAATTGAGGGCGGCTCGCTGGAAATCCCTGAAGAAATGGAGCACAGCGGTAAAACCTACAGCGTGGAAGCCAAGCTGAAACAGGGCATCGAAGCCACGTTGGCGAAGAAGATCGTCAAACTGATCAAAGACAGCAAGCTCAAGGTTCAGGCGCAGATTCAGGGCGAGCAGGTGCGCGTTACCGGGAAATCCCGCGATGACCTGCAAGGCGTGATCGCGCTGGTGCGCGGTGCCGGTCTGGGGCAACCCTTCCAGTTCAATAACTTCCGCGATTGA
Protein sequence:
MPSFDIVSEIDMQEVLNAVENATRELGTRWDFRNVPASFELNEKAQTIKAASESDFQVKQLIEILREKLAKRGIEGGSLEIPEEMEHSGKTYSVEAKLKQGIEATLAKKIVKLIKDSKLKVQAQIQGEQVRVTGKSRDDLQGVIALVRGAGLGQPFQFNNFRD
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
18200.8 | 163 | 5.98 | -0.442 | 39.95 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR007551,IPR035571,IPR035570,IPR036183
Pfam: PF04461
SMART:
KEGG: ddd:Dda3937_01966
PRINTS: