Effector profile
| PlantPEAD ID: PlantPEAD05351 | Uniprot ID: Q6D838 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 218491 | Pathogen type: Bacteria |
| Species: Pectobacterium atrosepticum | Strain: strain SCRI 1043 / ATCC BAA-672 | Other name: Erwinia carotovora subsp. atroseptica |
| Gene name: | NCBI Gene ID: BX950851 | |
| Entry name: Y1137_PECAS | Protein name: UPF0234 protein ECA1137 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCATCTTTCGATATTGTTTCGGAAATTGATATGCAGGAAGTCCGTAACGCGGTAGAAAATGCGACGCGCGATCTGAGTACCCGCTGGGATTTCCGTAATGTTCCGGCCAGTTTTGAACTGAATGAAAAATCACAGAGTATCAAAGTGGCCAGCGAATCTGATTTTCAGGTACAGCAACTGGTTGATATTCTGCGTGAAAAGCTGGTTAAGCGGGGTATTGAAGGCGGTGCGTTGGAGATCCCTGAAGAGATGGAACACAGCGGTAAAACGTACAGTGTGGAAGCGAAGCTGAAGCAAGGTATTGAAACTACGCTGGCGAAGCAACTCATCAAGCTGATTAAAGACAGTAAGCTGAAAGTGCAGGCGCAGATTCAGGGTGAACAGGTACGCGTCACCGGCAAAGCACGTGATGATTTGCAAGGTGTGATGGCGTTAATTCGTGGTGGTAATTTGGGGCAGCCGTTCCAGTTTACCAACTTCCGCGATTGA
Protein sequence:
MPSFDIVSEIDMQEVRNAVENATRDLSTRWDFRNVPASFELNEKSQSIKVASESDFQVQQLVDILREKLVKRGIEGGALEIPEEMEHSGKTYSVEAKLKQGIETTLAKQLIKLIKDSKLKVQAQIQGEQVRVTGKARDDLQGVMALIRGGNLGQPFQFTNFRD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18363.9 | 163 | 5.58 | -0.494 | 40.56 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR007551,IPR035571,IPR035570,IPR036183
Pfam: PF04461
SMART:
KEGG: eca:ECA1137
PRINTS: