Effector profile
PlantPEAD ID: PlantPEAD05353 Uniprot ID: A0A154V0Y1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: subsp. tessellarius strain DOAB 609 Other name:
Gene name: NCBI Gene ID: LQXA01000030
Entry name: A0A154V0Y1_9MICO Protein name: UPF0234 protein AWH51_09550
DOI:
Gene/Protein information
Gene sequence:
TCAGCGGAAGTTGACGAACTGCAGGTCGAGATCCACGTCGGCGCCCTTCAGCAGCGCGATGGTCTGCTGCAGCTCGTCGCGGCTCTTGCTCGAGACGCGGAGCTCGTCGCCCTCGACGCGGCTCTTGATGCCCTTGGGGCCCTCGTCGCGGATGATCTTGCCGAGCTTCTTCGCGTTCGCCTGGTCGATGCCCTGCTTGAGGGTGACCTCGATCCGGTACTCCTTGCCGGAGGCGAAGGGCTCGCCCTCCTCCAGGCTCTTGAGGCCGATGCCGCGCTTGATCATCTTCGACTGCAGCACGTCGAGGATCGCCTTCACGCGCTCCTCGCTGGAGGCCTTCATGAGGATGGTGTCACCGCTCCACTCGATGGAGGCGCCCACGTTCTTGAAGTCGTAGCGCTGCTCCACCTCCTTCTGGGTCTGGTGGACGGCGTTGTCCGCCTCCATGCGGTCGACCTTGCTGACGACGTCGAACGAGCTGTCCACGAT
Protein sequence:
MVDSSFDVVSKVDRMEADNAVHQTQKEVEQRYDFKNVGASIEWSGDTILMKASSEERVKAILDVLQSKMIKRGIGLKSLEEGEPFASGKEYRIEVTLKQGIDQANAKKLGKIIRDEGPKGIKSRVEGDELRVSSKSRDELQQTIALLKGADVDLDLQFVNFR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
18143.6 162 5.61 -0.554 30.45
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.