Effector profile
PlantPEAD ID: PlantPEAD05361 Uniprot ID: A0A2S5VWX8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: AY1B3 Other name:
Gene name: NCBI Gene ID: PSXY01000003
Entry name: A0A2S5VWX8_9MICO Protein name: UPF0234 protein C5E16_02155
DOI:
Gene/Protein information
Gene sequence:
ATGGCAGATTCCTCGTTCGACGTCGTCAGCAAGGTCGACCGCATGGAGGCGGACAACGCCGTCCACCAGACCCAGAAGGAGGTGGAGCAGCGCTACGACTTCAAGAACGTCGGCGCCTCCATCGAGTGGAGCGGCGACACCATCCTCATGAAGGCCTCCAGCGAGGAGCGCGTGAAGGCCATCCTCGACGTCCTCCAGTCGAAGATGATCAAGCGCGGCATCGGCCTCAAGAGCCTCGAGGAGGGCGACCCCTTCGCCTCCGGCAAGGAGTACCGCATCGAGGTCACCCTGAAGCAGGGCATCGACCAGGCGAACGCGAAGAAGCTCGGCAAGATCATCCGCGACGAGGGCCCGAAGAGCATCAAGAGCCGCGTCGAGGGCGACGAGCTGCGCGTCTCCAGCAAGAGCCGCGACGACCTCCAGCAGACCATCGCGCTGCTGAAGGGCGCGGACGTCGACCTCGACCTGCAGTTCGTCAACTTCCGCTGA
Protein sequence:
MADSSFDVVSKVDRMEADNAVHQTQKEVEQRYDFKNVGASIEWSGDTILMKASSEERVKAILDVLQSKMIKRGIGLKSLEEGDPFASGKEYRIEVTLKQGIDQANAKKLGKIIRDEGPKSIKSRVEGDELRVSSKSRDDLQQTIALLKGADVDLDLQFVNFR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
18117.5 162 5.59 -0.571 31.94
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.