Effector profile
PlantPEAD ID: PlantPEAD05364 Uniprot ID: A0A399SU34 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 2301718 Pathogen type: Bacteria
Species: Clavibacter lycopersici Strain: CFBP 8615 Other name:
Gene name: NCBI Gene ID: QWGT01000315
Entry name: A0A399SU34_9MICO Protein name: YajQ family cyclic di-GMP-binding protein
DOI:
Gene/Protein information
Gene sequence:
ATGGCAGATTCCTCGTTCGACGTCGTCAGCAAGGTCGACCGCATGGAGGCGGACAACGCCGTCCACCAGACCCAGAAGGAGGTGGAGCAGCGCTACGACTTCAAGAACGTGGGCGCCTCCATCGAGTGGAGCGGCGACACCATCCTCATGAAGGCCTCCAGCGAGGAGCGCGTGAAGGCGATCCTCGACGTGCTGCAGTCGAAGATGATCAAGCGCGGCATCGGCCTCAAGAGCCTCGAGGAGGGCGAGCCCTTCGCCTCCGGCAAGGAGTACCGCATCGAGGTCACCCTCAAGCAGGGCATCGACCAGGCGAACGCGAAGAAGCTCGGCAAGATCATCCGCGACGAGGGCCCGAAGGGCATCAAGAGCCGCGTCGAGGGCGACGAGCTCCGCGTCTCGAGCAAGAGCCGCGACGACCTGCAGCAGACCATCGCGCTGCTCAAGGGCGC
Protein sequence:
MADSSFDVVSKVDRMEADNAVHQTQKEVEQRYDFKNVGASIEWSGDTILMKASSEERVKAILDVLQSKMIKRGIGLKSLEEGEPFASGKEYRIEVTLKQGIDQANAKKLGKIIRDEGPKGIKSRVEGDELRVSSKSRDDLQQTIALLKGA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
16638.9 150 6.63 -0.611 34.25
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.