Effector profile
| PlantPEAD ID: PlantPEAD05383 | Uniprot ID: Q8VQ16 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 48984 | Pathogen type: Bacteria |
| Species: Pantoea agglomerans | Strain: pv. gypsophilae | Other name: Erwinia herbicola |
| Gene name: | NCBI Gene ID: AF462346 | |
| Entry name: Q8VQ16_PANAY | Protein name: Virulence factor avrPphD | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAATCCTCTACAATCTATTCAACACAACATTACAACTCCCCCAATCAGTGGCGGTCAGCCATTAGACGCGGTGGGCCCTCAGGGCCAGCAATCCCATCCCAGAAGGATTTCACCTTCTCAATTGAGCCAAAGTGCTCACCTGGCTCTAGAACGCCTTTCAGCTAATGCCGAACACCAACGCCTAGCCTCACTGGTACGCAACGCTCTGCAGGATGGCACATTTCAATTTCAATCCAGTAACGACACGCAAGCAACCTATAAAGCGTCAATCTGTCTGCCAGCTCACACCGATACCGTGAGAACCGACCACTTGATTAATAACGAGCTAACGGTTCAGGTCCGATTAAATGATCAATCGGAGTACGATATCGTCAGCGCACATTTACATGGCTCTCCGAAAGCCATATCCTTCGACGTACCCAGCCCTCCGCCAGCACATGGTTCAGCATCTTCTGTCTTGAGTGAACAGACCCATCTAGGCTTGAGTCGCGATATCTCACAAGATGCGCTAGATAGCAGTAGCCTGGAAAATCCGTTACTGAGCTCGCCAGACCATTATCGTCCGCCTTCACAGCCAAAGCCCGTGCATATAGGGTCGGTCCGCAGGGAAGCTGACAGCCTTGTTTCCGATAACCCAGTAGTGCAGGCCCTGCTATCGTTTGCACAGGCCTCCCAGGCATTTCCACCACAGGCCGCGAGCATTACCGGGGTCCAGTTGGAAATGCGGCCACGTCGGGATGATATTGAGAAAGCACTTGAGGAATTCAAAGGCGCCTTCACGGTTGAGAAGGCGCAATTAATGTCCAGTGCCAACTCGTCGGAGCGGGTAGATGAGGATGTTAACGCAGACATCCATATCCCTTTATTGCTCAAGGCCATCGAGCGGGGGGCTGCGGCATTTGGTCCAAACGCATCGATCGGCCAGAATAGCGCGAAAGCGTTTCTCGCTTCATGTGCTCCCCAAATAACGTCCAATGACGATGTCCTCTCCGAGTTCATCAACCAGAAACTCAAGCAGGACGACGATCTCCAGGTTCGCCTGGGCGCACAGGAATTGTTGCATGTAGCCACCAAGAAGGAATTCCAGCTCGGCGGTCTAGCTGGCAGCATCGGGGTCAGCTGCATACTCGGCTTGGCATGGGAGTTAGGCGCTTCTACGTTGTTGAAAAATTCCATCTTCGGCAAAAATTTCTCACCGAGCCAATATGCCTTGCAATTGGCTGGAATCGATTCAGTGCCTCCTTTGATGATCGAATCCATGGACACCATGTGCGTACTTGCCATCATCAAGGGCTTGAAAGGTGAGGAATGGTCCATGAGCGATCTACTTCCCAAGGCGTTTAAGGCTGGTGCCATTTCCTCGGTGGTGTCATTCCCCAATAATGTTTTGCAGTACGTGGGTTTCAAATCCAGAGTCGGCGATCTTGCGGCAAACTCAGTGACAACTGAAGCTGCCATCTTTGGCGCCGCCTCCGGTATTCCACCCGAAGTCAAGGAAAGTGAAGACCTGATGCGTGCTGGCTTATTCCAGAGCATGAAGGACGGCGTGATGGCTTATCCAGGCGGGGGGGAAGACACCAAAGAGACGATTCAACGGATGACGCAACATGCGCTGGATATCGCTCCGGGCGAAAGCACCGCTATCAAGTCCATGGGGCTGGCATCGATTGTCGGGATGATTCCTCTGATTGCCAGCGACAAGGCAACTGGGGTGCTGTCGGAAAAGGTACTGCGTGTTTTCCGGAGCGCCGTTTTCAATCCAATCGAAGCCATCGCTTTGAACGCGTTGGCGCTTGCCGGGCGCGTCAACGTTCCCGGGCTATTTGATTCCGACAATGCCAAGCATGCACGTGTGGTACAAACCATCCTTGCGCGGGCCAGCCAGCACATGGAAGCTGGAGACCGTGACATTTCCGCAGAGGAGCTACACCAAATGCTGTCTCCCCGGAGCGAGTTCTTGCGCCATGTGGGCTCTGCGATTGTAAACGGCATGAATGCCAGCTTTGAGGCAATTCCCGCCCTGGTTCGGAAGCTTGGATACGGTAAGGATCCATTGGCCGAACGTATTCCGTATCAAGACCTAGCTGTGCCCGACACGCCGCGGCAGCCAGCACCCTGA
Protein sequence:
MNPLQSIQHNITTPPISGGQPLDAVGPQGQQSHPRRISPSQLSQSAHLALERLSANAEHQRLASLVRNALQDGTFQFQSSNDTQATYKASICLPAHTDTVRTDHLINNELTVQVRLNDQSEYDIVSAHLHGSPKAISFDVPSPPPAHGSASSVLSEQTHLGLSRDISQDALDSSSLENPLLSSPDHYRPPSQPKPVHIGSVRREADSLVSDNPVVQALLSFAQASQAFPPQAASITGVQLEMRPRRDDIEKALEEFKGAFTVEKAQLMSSANSSERVDEDVNADIHIPLLLKAIERGAAAFGPNASIGQNSAKAFLASCAPQITSNDDVLSEFINQKLKQDDDLQVRLGAQELLHVATKKEFQLGGLAGSIGVSCILGLAWELGASTLLKNSIFGKNFSPSQYALQLAGIDSVPPLMIESMDTMCVLAIIKGLKGEEWSMSDLLPKAFKAGAISSVVSFPNNVLQYVGFKSRVGDLAANSVTTEAAIFGAASGIPPEVKESEDLMRAGLFQSMKDGVMAYPGGGEDTKETIQRMTQHALDIAPGESTAIKSMGLASIVGMIPLIASDKATGVLSEKVLRVFRSAVFNPIEAIALNALALAGRVNVPGLFDSDNAKHARVVQTILARASQHMEAGDRDISAEELHQMLSPRSEFLRHVGSAIVNGMNASFEAIPALVRKLGYGKDPLAERIPYQDLAVPDTPRQPAP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 75457.4 | 706 | 5.54 | -0.157 | 47.24 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: