Effector profile
PlantPEAD ID: PlantPEAD05465 Uniprot ID: A0A399NWC5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: Other name:
Gene name: NCBI Gene ID: QWEC01000021
Entry name: A0A399NWC5_9MICO Protein name: Glycerophosphodiester phosphodiesterase
DOI:
Gene/Protein information
Gene sequence:
TCAGGACACCCGGTTCCCAGGCGAATCCCAGTCCCTGTCGCCGATGGCGGCGAGCGCGAGGTCGGCGCGGTCGGTCACGATGCCGTGCACCCCGGCCCTGACCAGGCGGATCACCTCGTCAGGGTCGTCCACCGTCCAGACGTGCACCTCGCGGACGGCGCGCGCGAGCCGGCGGACCATCACGGGGGAGACCGTGCGGATCCCGATCACCCGACAGGGCATCTGCACGGCGTCGACGCCGCGGAGGGCGAGGCGCACGACCGGCGCGAGCGCGAGCCGCGCGCCGAGGACCGCGAGGACGAGGCGACCCGCGTCGGCGGACGTGGCAGCGCCGGGGAGCAGGGCCAGCGCGCGGCGTCGCCGGGAGCCCGAGAACGACGTGACGAGCACGCGGTCGACGGCGTCGGCGTCGCGGATCGCCTGAGCGGCGGCGGCGGGCGCGTCCCGGCCCTTCACGTCGACGTTCAGGCGCGCGTCGGGCAGGGCCGCGAGCAGCTCTCCGAGCGTGGCGACGCGCGCGCCGGACCCGAGGTCGATGGCGCGCAACTCCGCCAGCGTCCTGTCGCGGACGCGACCGGGGCGGCCGGTGAGGCGTCGGAGGTCGGCATCGTGCCAGAGCACGCAGGCGCCGTCGGCGGTCACGTGCACGTCCGTCTCGAGGTGGGTCACGCCGAGCTCCCACGCCGCGCGGAAGGCGTCGAGGGTGTTCTCCACGGCACCGGATCCGGTCCACCCGCGGTGCGCGAGCACGCGGGGCACGGCGCCGTCGAACCAGGCGCCGCGCGTCAT
Protein sequence:
MTRGAWFDGAVPRVLAHRGWTGSGAVENTLDAFRAAWELGVTHLETDVHVTADGACVLWHDADLRRLTGRPGRVRDRTLAELRAIDLGSGARVATLGELLAALPDARLNVDVKGRDAPAAAAQAIRDADAVDRVLVTSFSGSRRRRALALLPGAATSADAGRLVLAVLGARLALAPVVRLALRGVDAVQMPCRVIGIRTVSPVMVRRLARAVREVHVWTVDDPDEVIRLVRAGVHGIVTDRADLALAAIGDRDWDSPGNRVS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
27927.1 262 10.57 0.108 24.63
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.