Effector profile
| PlantPEAD ID: PlantPEAD05467 | Uniprot ID: A0A399PQ05 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 28447 | Pathogen type: Bacteria |
| Species: Clavibacter michiganensis | Strain: subsp. insidiosus strain CFBP 6488 | Other name: |
| Gene name: | NCBI Gene ID: QWEA01001004 | |
| Entry name: A0A399PQ05_9MICO | Protein name: Glycerophosphodiester phosphodiesterase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGGACCCGGGGTTCCCAGGCGAATCCCAGTCCCTGCCGCCGAGGGCGGCCAGGGCGAGATCGGGCCGATCCGTCACGACGCCGCGGACACCTGCCCGGACCAGGCGGATCATCTCGTCCGGGTCGTCCACCGTCCAGACGTGCACCTCGCGGACGGCGCGGGCCAACCGGGCGACCATCGTGGGCGAGGCGGTGCGGATACCGAGCACTCGGCAGGGCATCTGCACGGCGTCGACGCCGCGGAGGGCGAGGCGGATCACCGGTGCGAGACCCAGCCGCGCACCGAGGACGGCGAGCACGAGCCGTCCGGCGTCCGCCGACGTCGCCGCGCCGGGGAGGAGGGCCAGCGCGCGTCGCCGCC
Protein sequence:
RRRALALLPGAATSADAGRLVLAVLGARLGLAPVIRLALRGVDAVQMPCRVLGIRTASPTMVARLARAVREVHVWTVDDPDEMIRLVRAGVRGVVTDRPDLALAALGGRDWDSPGNPGS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 12518.7 | 119 | 11.49 | 0.239 | 29.09 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR030395,IPR017946
Pfam: PF03009
SMART:
KEGG:
PRINTS: