Effector profile
| PlantPEAD ID: PlantPEAD05468 | Uniprot ID: A0A399Q4A7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 31963 | Pathogen type: Bacteria |
| Species: Clavibacter nebraskensis | Strain: CFBP 7577 | Other name: |
| Gene name: | NCBI Gene ID: QWED01000171 | |
| Entry name: A0A399Q4A7_9MICO | Protein name: Glycerophosphodiester phosphodiesterase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GCCCGGGCGACGGCCGCCGGGGCGTCCGCGCCCTTCACGTCGATGTTGAGCCGGGCGTCGGGCAGGTCCGCCAGCAGCTCCGCGAGCGTGGCGACGCGTGCCCCGGATCCGAGGTCGATGGCCCGGAGCTCCGCCAGCGTCGAGTCGCGGACGCGGCCGCGCCGGCCGGTGAGGCGTCGGAGGTCGGCGTCGTGCCAGAGCACGCACGCGCCGTCGGCCGTGACGTGCACATCGGTCTCGAGGTGGGTGACGCCGAGCTCCCACGCCGCGCGGAAGGCGTCGAGCGTGTTCTCCACGGCTCCGGACCCGGTCCACCCGCGGTGCGCCAGGACGCGGGGCACGTCGCCGGAGAACCAGGCGCCGCGGGTCAC
Protein sequence:
MTRGAWFSGDVPRVLAHRGWTGSGAVENTLDAFRAAWELGVTHLETDVHVTADGACVLWHDADLRRLTGRRGRVRDSTLAELRAIDLGSGARVATLAELLADLPDARLNIDVKGADAPAAVARA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13221.9 | 124 | 6.04 | -0.057 | 25.42 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR030395,IPR017946
Pfam: PF03009
SMART:
KEGG:
PRINTS: