Effector profile
| PlantPEAD ID: PlantPEAD05490 | Uniprot ID: Q9R473 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 362 | Pathogen type: Bacteria |
| Species: Rhizobium radiobacter | Strain: | Other name: Agrobacterium tumefaciens,Agrobacterium radiobacter |
| Gene name: Torf13 | NCBI Gene ID: AJ237588 | |
| Entry name: Q9R473_RHIRD | Protein name: Acrocinopine synthase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTATTTTGACGTTTCTATATTAAGATCCAAGTGTGGACTTAGATGAGAAACTTCACGATCGATTCCTTGATTTCGCCATTCCCAGATAGCCATTTCATCTTCAGGTCGATCTGAGATTACCCAGTCCGCAATTGTTGCCGAATTTCCTGGTGTTCCTTTTCTCCAACGTATGTGTTTCCGCTCGTCTGTCTCATGACGTCGGGCCCTGCCTGTTTTAATGTCGATGGAGAACTCACCCCGCTCGCCGGAATCCAGGAGGGCTGCGAAGTCATAGCATCTAGTGACCGCAGCAAACTTCAGGTGAGGGCGTTTAGCTCTAATCATCGTATCCTCCTTGAGGTAATACGCGAGTCTCACTGCGGCTTGATCTGAATCGAAAGCCAACAAGACATCTTTATCGACAACTTGGCCCAGCAAATTTCTGGTCACCCCGGAGAAAACAACATGTGCCGCCACGATCCTCATGTCCTGCATTAGCATGGAATCAAACCAGGCTTTGCCTGCCAAATACAAATCATCGACTGTGGGTTCAGTAACTTGACGCAGACGGGCCAGTCGGCACAGTTCTTCAGGAAAAAGAGCGGGCATCAGGGCGATTGATTTCCTCCAAGCAGATGCGGGCTGGGCATTTAAAACTGCATCAACGAAGGCACCGCCGTGTGGGTATTCAAATGTATAGAAAAGTACAACAACTCTTTGATGGTATTCCGGCCGGTGGCTAAGCCAAGCCACAATCACGTGAGCCTCGTAGTTCCTACCGTCTAGGAAAATGGTGGCATCTGAATTAGCCAAAAATACCTTGCTGAATATTTCAGTTAACAAAGGAATATGATCAATGGTTTCAAGATACTTGTCTTGTATTATCCCATTTGATACCTCTCGAATAATAACAGGTACATCCTTGATTTTTGATGAGTGAATTTCATTGAAAAGCTTATCTCCCAACTTTTCAGACACTCGCCAAGTGTTAAGATCATGAGAAACGATAGCTACATTATCTGAAGTTAAACAGACGTCCAACTCGCTCAGATTGCGTCCTCCTTGCCCGAGCGCGGCCAACAATGAGCTCGCGGTGCATTCTTGAATTCGTTTCCCTAAATTGAACAT
Protein sequence:
MFNLGKRIQECTASSLLAALGQGGRNLSELDVCLTSDNVAIVSHDLNTWRVSEKLGDKLFNEIHSSKIKDVPVIIREVSNGIIQDKYLETIDHIPLLTEIFSKVFLANSDATIFLDGRNYEAHVIVAWLSHRPEYHQRVVVLFYTFEYPHGGAFVDAVLNAQPASAWRKSIALMPALFPEELCRLARLRQVTEPTVDDLYLAGKAWFDSMLMQDMRIVAAHVVFSGVTRNLLGQVVDKDVLLAFDSDQAAVRLAYYLKEDTMIRAKRPHLKFAAVTRCYDFAALLDSGERGEFSIDIKTGRARRHETDERKHIRWRKGTPGNSATIADWVISDRPEDEMAIWEWRNQGIDREVSHLSPHLDLNIETSK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41788.7 | 368 | 6.02 | -0.19 | 35.58 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR030395,IPR017946
Pfam: PF03009
SMART:
KEGG:
PRINTS: