Effector profile
PlantPEAD ID: PlantPEAD05676 | Uniprot ID: Q6AC35 | Source: Orthologous |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1575 | Pathogen type: Bacteria |
Species: Leifsonia xyli | Strain: subsp. xyli strain CTCB07 | Other name: |
Gene name: Pat1 | NCBI Gene ID: AE016822 | |
Entry name: Q6AC35_LEIXX | Protein name: Pat1 protein | |
DOI: |
Gene/Protein information
Gene sequence:
TTGTTTAGTTTTCGTTGGCGTGTTTTACGTCGCCGAGCATCGATCGCGGGTCTCGTACTAGCTTTGGTCGCCGGCCTGGGGGTAGCCACCACAGGGCCCGCATCCGCGGTCCAACCCATCCGTTCGGGCCCGATGATCGTCGGGGGAACCGAACTACAATTCCCCGGGAATACAGAATGTACGGCAGGTTTAGTGATGGTCAATACCCGTTTGTGGAATAACATCACGGCGTACCAGCGGAATACTCGCTATGTGTTGACCGCGGGTCACTGCGGAAATGTAGGTGACCGCGTGAAGGTCAACAACGTAGATATTGGATGGGTTAGCTGGAAACCAGGGCCACCTGACCCTAGCAGGCCACCTGGCCCTGGCAGGCCACCTGGCCCTGGCAGGCCACCTCACCCTGTGATTCCTTACCCTGACATGATGATGGTTCAGGTTAAGCCGACTGTTAATACTACTTTTCATTGCCATAATGAGCGTTCCGGGTTCCATTGCTTACCGATTTATCACAGCGCCCCCCGCGCTGTCGGCCGGGTCATAACCTACCAACCACGGCTACGTCAATTCGGGGCTGTTCCTGTCGAAACTTGGCAGGATGACGTCCCGGATAATGTGAACTGGTTCTGCACGAGCGGTATATCCACGGATTTCACCTGTCTCTGGGAAAAATACCAGCAGCTCCCTCCCGGGGTTGATATCGGCCCCTATCGGAAGGCTGCGCGCAGTCTGAGTTCTACTGCACCTCCAGGAGATTCGGGAGGTCCGGTGTTCAGCGATCCCAACGCGGGTAACGCTAATCCGAACGGCGTCGCTTTCTACGGCATAGTATTGGGCCGTTTCGCTCCCCCAGCCCCGGAAAATGCCATGTATTATCTCCCTGCTGGGGTTTTCTTCACTCAGTGGGAGTGGGGACAAGCTTATGCTGTGGCTCCAGCATAG
Protein sequence:
MFSFRWRVLRRRASIAGLVLALVAGLGVATTGPASAVQPIRSGPMIVGGTELQFPGNTECTAGLVMVNTRLWNNITAYQRNTRYVLTAGHCGNVGDRVKVNNVDIGWVSWKPGPPDPSRPPGPGRPPGPGRPPHPVIPYPDMMMVQVKPTVNTTFHCHNERSGFHCLPIYHSAPRAVGRVITYQPRLRQFGAVPVETWQDDVPDNVNWFCTSGISTDFTCLWEKYQQLPPGVDIGPYRKAARSLSSTAPPGDSGGPVFSDPNAGNANPNGVAFYGIVLGRFAPPAPENAMYYLPAGVFFTQWEWGQAYAVAPA
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
33950.7 | 313 | 9.34 | -0.212 | 48.74 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR009003,IPR043504,IPR018114,IPR033116
Pfam:
SMART:
KEGG: lxx:Lxx24245
PRINTS: