Effector profile
| PlantPEAD ID: PlantPEAD06095 | Uniprot ID: A0A068LF39 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80869 | Pathogen type: Bacteria |
| Species: Paracidovorax citrulli | Strain: | Other name: Acidovorax citrulli |
| Gene name: | NCBI Gene ID: KF944762 | |
| Entry name: A0A068LF39_PARCI | Protein name: Type III effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GTGAACGTCCATCTGCATGCCATTCAGTCCCGCCCTTCAGGCGGCCAACTGCTCAGGGAACTGGCGGAGATCGGCGACAGGCAGAACCACAAGCTCACCATCCACGAAATGGAGCCCACCAGAGCAGGGCCGCGCGCGCAAGGCGTGCTGTCCCGCCATCAGTTGGAAAGGGACCCCAACGCAACCAGTTTCAGCGAGATCAATGAAATTGCTGAGGAGCGGTATGCCATCAAGACCCGCAACGGCCCCAATGAAGGCTCGAGCGTGCTGATATCCTGGACAGCGCATCAGACCAGTATGGGACTGGACTCGGATGGAGACCCCACGGGCCCGTGCGCCAGTCATACGGACAAGGTGAGCCTTCTGGCCCATGAACTCGTGCATGCCAAACACATGATGGCTGGCACCTGGAAAGGAAATTCCGGCAGTCCCGCCGACCCTGAATCATCTGCCGGCAAAGAAGAGTTGCGAGCGGTCGGGCTCGGCAAGTATAAATATTCGGCAACCGGTGAACCTTCTGAAAACTCAGTCAGGGCAGAACACGGCTTGCCGAAAAGAAAGAGCTACCATTATTCAGGTTACCGAAGCGAC
Protein sequence:
MNVHLHAIQSRPSGGQLLRELAEIGDRQNHKLTIHEMEPTRAGPRAQGVLSRHQLERDPNATSFSEINEIAEERYAIKTRNGPNEGSSVLISWTAHQTSMGLDSDGDPTGPCASHTDKVSLLAHELVHAKHMMAGTWKGNSGSPADPESSAGKEELRAVGLGKYKYSATGEPSENSVRAEHGLPKRKSYHYSGYRSD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21501.8 | 197 | 6.63 | -0.855 | 38.37 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR028208
Pfam: PF14891
SMART:
KEGG:
PRINTS: