Effector profile
| PlantPEAD ID: PlantPEAD06176 | Uniprot ID: Q7YW99 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 6306 | Pathogen type: Nematoda |
| Species: Meloidogyne incognita | Strain: | Other name: Southern root-knot nematode |
| Gene name: | NCBI Gene ID: AF527788 | |
| Entry name: Q7YW99_MELIC | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GGTTTAATTACCCAAGTTTAAGGGGTAAAAAATGTTTTCAAGCAAAACTAGCTTCAATTTCCTTCTTCTAATTTCTTCATTTGCTTTATGTAAGGCCGACTTTTGGCCTAAAGCAAGAAATAATATTACGGTATCCGAAACAATACAAATTACTAACCGTGACTGTAATTTTGATCGTTATATTCCCGATCCGAGTAAACTTGGAAACGGAGGTCAGAACGAGCATCAAGGCTACGTTTTTGAAATAAAAAATGGTGGTTCTTTATCTAATTGTATAATTGGTGCTAGGCCTGGGACTAAAGGCTCTGCTCATGGAGTTCTTTGTGATGGAGATTGCGATATAAACAATGTTTGGTTTGAGGATGTTGGGGAAGATGCTATTAATTTTAATGGAGATTCTGATGGTTGTGTTTATAATGTTAATGGTGGTGGTGCTAAGAATGGAGAAGACAAAGTTATGCAATTTGACGGAAAGGGGACACTGAATGTTAACAACTATTATGTAGACAATTATGTCCGTTTTTGTCGCTCCTGTGGCGACTGCGGTGACCAACATCAACGCCATATCGTGATTACTAATCTGACAGCGGTTCATGGCCAAGCTGGTCAATTCGTTTGTGGAGTAAATAGCAATTATCAGGATACGTGTACCTTGCATGATATAAAAATGGAGAAGGGTATTCACCCCTGCAAGGTTTTTGATGGCAATTCTGATGGATCTGAGCCAACTTCGAATAACGACGAAGAGGACCACGGAGACGGGAAATTTTGTATTTATAAGAAGGGCGATATTAAATATATTGGATCCAAACCAAAGCCGAAAAGCAAAAAGAGCGCAAAGAATTAAGTGCCGGAAGTTAAAAAGCCTTGAAGTTAAAAACGTTTAAAGGGATAAATTGTAGGGTTGTCGGTTCTGAACCGAACCGAGCCGAAGAACCGATGATTTTTCGGTTCGGTTCCGGATATCCAAAGATTTTCCAAGAGCCGACAACCCTAGTAGTATGAGTAGAATCTATTATTATTTGGAATACTAATTTAATTTTGTGAAATTTCTTTTTACTATATTAATCCTGTCCAATAAAATTATGAAATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein sequence:
MFSSKTSFNFLLLISSFALCKADFWPKARNNITVSETIQITNRDCNFDRYIPDPSKLGNGGQNEHQGYVFEIKNGGSLSNCIIGARPGTKGSAHGVLCDGDCDINNVWFEDVGEDAINFNGDSDGCVYNVNGGGAKNGEDKVMQFDGKGTLNVNNYYVDNYVRFCRSCGDCGDQHQRHIVITNLTAVHGQAGQFVCGVNSNYQDTCTLHDIKMEKGIHPCKVFDGNSDGSEPTSNNDEEDHGDGKFCIYKKGDIKYIGSKPKPKSKKSAKN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 29672.9 | 271 | 5.89 | -0.638 | 16.15 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: