Effector profile
| PlantPEAD ID: PlantPEAD06236 | Uniprot ID: Q49S24 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5518 | Pathogen type: Fungi |
| Species: Fusarium graminearum | Strain: F4 | Other name: Gibberella zeae, Wheat head blight fungus |
| Gene name: Xyl16 | NCBI Gene ID: AY648859 | |
| Entry name: Q49S24_GIBZA | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGAACCTCTACTCTTTTGACGATTGCCAACTCTGGCACAGCATTTGCTGCAGTGCAAATGTACAACCAGTGTGGTGGCAGCGCCTATTCTGGAGACAAGGAGTGTCCTTCTGGATCAACCTGTGTTGAAGTCAGCAAGTGGTACAGCCAATGCATCCCTGACTCCTCCTCCAAGAAAGCTGCTTCAGTCGAGAAGACCGATTTCGACTTTCGCGCCTTCGGATTCCCAGGATTTCCTGCACCTCCTCAAGCCCCTCCCGCCGAGGAGGACAACAGCCAGGGCAATGACAATACCCCAGCTCCGTTCCTTTCCACTATCCCTACTCCTGAAGGGCCTACCAATACTCCCGAACAGCCCGTTGACGACCCTGTCGATACCATTATCGCTAACCCGACTACTGCTCCCACCAGCGAGCCCATTGAGACCGGATCTGGATCTGGATCTGTAGCTATCACGCGAACTATTCCAGCTTCCAGCGGTGCTACTGCTGTTGCAACTGCTATTCCCGTTTCTGGTGAGCTCGACGGTGGCATGGCCTACTACGATCGATCCCCTTCTGTCTGCAAGGAACAAGAAGAGACTGGTGAGGCTGATGCCATGTTCATTCTTGGAGACGGCGCCACTCTTCGTAACGTCATCATTGGCCCTGGCCAGGCTGAGGGTGTTCATTGCAAGGGCACATGCACTCTCGAAAACGTTTGGTTCGAGGATGTCTGTGAAGATGCCATCACCTTGAAGCAAAAATCAGGTACCTCTATCATCCGTGGAGGTGGCGCTTTCCACGCTGCCGACAAGGTCGTTCAGTTCAACGGTCGCGGCACCGTCGAGATTTCTGACTTTTATGTTGAGGATTATGGTAAACTTGTTCGATCTTGCGGTAACTGTAAGGACAATGGCGGTCCTCGAAACGTCGTTATCGAGAACGTTGCTGCTGTCAACGGTGGCGTTCTCTGCGGCATCAACACCAACTATGGTGATACGTGCACCATCTCCAACGCTTGTCAGGATAAGGGCAAGAACTGTGATCTTTTTGAGGGTAACTCTGACGGCAGTGAGCCAACTAAGCTGTCCAGTGGTCCCGATGGCACTTCTTGCAAGGTTGACAGCTTTGCTGAGACCTGCTAG
Protein sequence:
MRTSTLLTIANSGTAFAAVQMYNQCGGSAYSGDKECPSGSTCVEVSKWYSQCIPDSSSKKAASVEKTDFDFRAFGFPGFPAPPQAPPAEEDNSQGNDNTPAPFLSTIPTPEGPTNTPEQPVDDPVDTIIANPTTAPTSEPIETGSGSGSVAITRTIPASSGATAVATAIPVSGELDGGMAYYDRSPSVCKEQEETGEADAMFILGDGATLRNVIIGPGQAEGVHCKGTCTLENVWFEDVCEDAITLKQKSGTSIIRGGGAFHAADKVVQFNGRGTVEISDFYVEDYGKLVRSCGNCKDNGGPRNVVIENVAAVNGGVLCGINTNYGDTCTISNACQDKGKNCDLFEGNSDGSEPTKLSSGPDGTSCKVDSFAETC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38879.8 | 375 | 4.34 | -0.341 | 38.13 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR035971,IPR000254,IPR004898,IPR012334,IPR011050
Pfam: PF00734,PF03211
SMART: SM00236
KEGG:
PRINTS: