Effector profile
PlantPEAD ID: PlantPEAD06253 Uniprot ID: C1KBL9 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 31243 Pathogen type: Nematoda
Species: Globodera rostochiensis Strain: Obersteibach Other name: Golden nematode worm, Heterodera rostochiensis
Gene name: Pel2 NCBI Gene ID: FJ810105
Entry name: C1KBL9_GLORO Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
TTCGTTCTTTGCTTCTTTTTTGCCAATTTGACCCCGATATTTGCAAATTGGCCCACCGCGACGGGCGATGAGACAGTCCCTGAGACAATAATAATTGTCGGCGGGATCAAAGACTTCAAATTCAAACGTTTGAGCGCTTCATTAGCATTGGGCACAGGCGACCAACATGAGGACCAAAAAGCGATTATTCGTGCCGAAAAGGGGGCGGTGATCAAAAATTTGATTATCGGCAAAAATGGTGCCGACGGCATTCATTGTTACGATAGTTGTACCTTGGAGAATGTTTGGTTCGAGTCCGTTGGCGAAGATGCGACAACGTTTCGGACCAGCAAGGATTGTGGCGCCGGATCATTTGTCGTCACGGGTGGTGGCGCTCGAAATGCTCACGACAAAGTGTCTCAGATGAACGGTGGTGGGCAATCGACAATTAGAAATTATGTGGGCGAAAACATTGGTAAATTGGCGCGCTCGTGCGGTAATTGCGAAGTGCAATGCAAAAACAGAAAGTTTGTTGTGGAAAATGTGAAAGTGACGGGACTGAAAACGATGCTCATCGGACTGAACGAAAACTACGGCGACGTGGCGTCTATCAAAAACGTGCAGGTCAATGGGAAAACGAGCGCTATTTGTTGCGAGTTCATCGCCAACAACCAGCAACAGGAGCCGAAATTAGTGCGCAGCTATGGCGTCGGCTCAGCCGGTGACGCCAAAAACTGCATCATTTCAGGCGCCAAAAGCGGCTGA
Protein sequence:
FVLCFFFANLTPIFANWPTATGDETVPETIIIVGGIKDFKFKRLSASLALGTGDQHEDQKAIIRAEKGAVIKNLIIGKNGADGIHCYDSCTLENVWFESVGEDATTFRTSKDCGAGSFVVTGGGARNAHDKVSQMNGGGQSTIRNYVGENIGKLARSCGNCEVQCKNRKFVVENVKVTGLKTMLIGLNENYGDVASIKNVQVNGKTSAICCEFIANNQQQEPKLVRSYGVGSAGDAKNCIISGAKSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26299.8 247 8.31 -0.146 17.95
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.