Effector profile
PlantPEAD ID: PlantPEAD06260 Uniprot ID: C1KBM8 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 31243 Pathogen type: Nematoda
Species: Globodera rostochiensis Strain: B1 Other name: Golden nematode worm, Heterodera rostochiensis
Gene name: Pel2 NCBI Gene ID: FJ810115
Entry name: C1KBM8_GLORO Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
TTCGTTCTTTGCTTCTTTTTTGCCAATTTGACTCCGATATTTGCAAATTGGCCCACAGCGACGGGCGATGAGACAGTCCCTGAGACAATAATAATTGTCGGCGGGATCAAAGACTTCAAATTCAAACGTTTGAGCGCTTCATTAGCATTGGGCACAGGCGACCAACATGAGGACCAAAAAGCGATTATTCGTGCCGAAAAGGGGGCGGTAATCAAAAATTTGATTATCGGCAAAAACGGTGCCGACGGCATTCATTGTTACGATAGTTGTACTTTGGAGAATGTTTGGTTCGAGTCCGTTGGCGAAGATGCGACAACGTTTCGGACCAGCAAGGATTGTGGCGCCGGATCATTTGTCGTCACGGGTGGTGGTGCTCGAAATGCTCACGACAAAGTGTTTCAGATGAACGGTGGTGGACAATTGACAATTAGAAATTATGTGGGCGAAAACATTGGCAAATTGGCGCGCTCGTGCGGTAATTGCGAAGTGCAATGCAAAAACAGAAAGTTTGTTGTGGAAAATGTGAAAGTGACGGGACTGAAAACGATGCTCATCGGACTGAACGGAAACTACGGCGACGTGGCGTCTATCAAAAACGTGCAGGTCAATGGGAAAACGAGCGCTATTTGTTGCGAGTTCATCGCCAACAACCAGCAACAGGAGCCGAAATTAGTGCGCAGCTATGGCGTCGGCTCAGCCGGTGACGCCAAAAACTGCATCATTTCAGGCGCCAAAAGCGGCTGA
Protein sequence:
FVLCFFFANLTPIFANWPTATGDETVPETIIIVGGIKDFKFKRLSASLALGTGDQHEDQKAIIRAEKGAVIKNLIIGKNGADGIHCYDSCTLENVWFESVGEDATTFRTSKDCGAGSFVVTGGGARNAHDKVFQMNGGGQLTIRNYVGENIGKLARSCGNCEVQCKNRKFVVENVKVTGLKTMLIGLNGNYGDVASIKNVQVNGKTSAICCEFIANNQQQEPKLVRSYGVGSAGDAKNCIISGAKSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26313.9 247 8.5 -0.1 14.44
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.