Effector profile
PlantPEAD ID: PlantPEAD06262 Uniprot ID: C1KBN2 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 31243 Pathogen type: Nematoda
Species: Globodera rostochiensis Strain: B4/A Other name: Golden nematode worm, Heterodera rostochiensis
Gene name: Pel2 NCBI Gene ID: FJ810119
Entry name: C1KBN2_GLORO Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
TTCGTTCTTTGCTTCTTTTTTGCCAATTTGACTCCGATATTTGCAAATTGGCCCACTGCGACGGGCGATGAGACAGTCCCTGAGACAATAATAATTGTCGGCGGGATCAAAGACTTCAAATTCAAACGTTTGAGCGCTTCATTAGCATTGGGCACAGGCGACCAACATGAGGACCAAAAAGCGATTATTCGTGCCGAAAAGGGGGCGGTGATCAAAAATTTGATTATCGGCAAAAATGGTGCCGACGGCATTCATTGTTACGATAGTTGTACCTTGGAGAATGTTTGGTTCGAGTCCGTTGGCGAAGATGCGACAACGTTTCGGACCAGCAAGGATTGTGGCGCCGGATCATTTGTCGTCACGGGTGGTGGCGCTCGAAATGCTCACGACAAAGTGTTTCAGATGAACGGTGGTGGACAATTGACAATTAGAAATTATGTGGGCGAAAACATTGGTAAATTGGCGCGCTCGTGCGGTAATTGCGAAGTGCAATGCAAAAACAGAAAGTTTGTTGTGGAAAATGTGAAAGTGACGGGACTGAAAACGATGCTCATCGGACTGAACGAAAACTACGGCGACGTGGCGTCTATCAAAAACGTGCAGGTCAATGGGAAAACGAGCGCTGTTTGTTGCGAGTTCATCGCTAACAACCAGCAACAGGAGCCGAAATTAGTGCGCAGCTATGGCGTCGGCTCAGCCGGTGACGCCAAAAACTGCATCATTTCAGGCGCCAAAAGCGGCTGA
Protein sequence:
FVLCFFFANLTPIFANWPTATGDETVPETIIIVGGIKDFKFKRLSASLALGTGDQHEDQKAIIRAEKGAVIKNLIIGKNGADGIHCYDSCTLENVWFESVGEDATTFRTSKDCGAGSFVVTGGGARNAHDKVFQMNGGGQLTIRNYVGENIGKLARSCGNCEVQCKNRKFVVENVKVTGLKTMLIGLNENYGDVASIKNVQVNGKTSAVCCEFIANNQQQEPKLVRSYGVGSAGDAKNCIISGAKSG
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26372 247 8.31 -0.114 15.39
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.