Effector profile
| PlantPEAD ID: PlantPEAD06264 | Uniprot ID: Q53EK1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 31243 | Pathogen type: Nematoda |
| Species: Globodera rostochiensis | Strain: Ro-1 Mierenbos | Other name: Golden nematode worm, Heterodera rostochiensis |
| Gene name: Pel2 | NCBI Gene ID: AY094613 | |
| Entry name: Q53EK1_GLORO | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
AAAAATGCTGCACCATTTATTCGTTCTTTGCTTCTTTTTTGCCAATTTGACTCCGATATTTGCAAATTGGCCCACCGCGACGGGCGATGAGACAGTCCCTGAGACAATGATCATTGTCGGCGGGATCAAAGACTTCAAATTCAAACGTTTGAGCGCTTCATTAGCATTGGGCACAGGCGACCAACATGAGGACCAAAAGCGATTATTCGTGCCGAAAAAGGGGGCGGTGATCAAAAATTTGATTATCGGCAAAAATGGTGCCGACGGCATTCATTGTTACGATAGTTGTACTTTGGAGAATGTTTGGTTCGAGTCCGTTGGCGAAGATGCGACAACGTTTCGGACCAGCAAGGATTGTGGCGCCGGATCATTTGTCGTCACGGGTGGTGGCGCTCGAAATGCTCACGACAAAGTGTTTCAGATGAACGGTGGTGGACAATTGACAATTAGAAATTATGTGGGCGAAAACATTGGTAAATTGGCGCGCTCGTGCGGTAATTGCGAAGTGCAATGCAAAAACAGAAAGTTTGTTGTGGAAAATGTGAAAGTGACGGGACTGAAAACGATGCTCATCGGACTGAACGAAAACTACGGCGACGCGGCGTCTATCAAAAACGTGCAGGTCAATGGGAAAACGAGCGCTATTTGTTGCGAGTTCATCGCCAACAACCAGCAACAGGAGCCGAAATTAGTGCGCAGCTATGGCGTCGGCTCAGCCGGTGACGCCAAAAACTGCATCATTTCAGGCGCCAAAAGCGGCTGATCAGTGATTGTGAGTGATTGAGCAATTATTTACCCGATGATGGCACGTGAAACCCTAAATCATAATATTTATTAATGACTTTGATCGATTGGTGATAAGAACAATTTTTTTTTTAATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein sequence:
MLHHLFVLCFFFANLTPIFANWPTATGDETVPETMIIVGGIKDFKFKRLSASLALGTGDQHEDQKRLFVPKKGAVIKNLIIGKNGADGIHCYDSCTLENVWFESVGEDATTFRTSKDCGAGSFVVTGGGARNAHDKVFQMNGGGQLTIRNYVGENIGKLARSCGNCEVQCKNRKFVVENVKVTGLKTMLIGLNENYGDAASIKNVQVNGKTSAICCEFIANNQQQEPKLVRSYGVGSAGDAKNCIISGAKSG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 27095 | 252 | 8.64 | -0.133 | 17.34 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: