Effector profile
PlantPEAD ID: PlantPEAD06328 Uniprot ID: E0SCP0 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 204038 Pathogen type: Bacteria
Species: Dickeya dadantii Strain: strain 3937 Other name:
Gene name: HrpW NCBI Gene ID: CP002038
Entry name: E0SCP0_DICD3 Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGGCTGACATCAGTATCACACTCAGTATCCCCAACGCGGGCCTGCAAGGCGGACTGGGCGGTTTGGGCGGCGCGGACCGTACCAGCAACAGCGGGCTGGGCAATAACGGGCTTTCCGGTAATAAATCCTCTTCGCAGGACACCAAATTACTGGAAGCGCTGGCGATCGTTCTGACTGCCCTGCTGAGCAACAACGGCGGTACGCAAGGCAGCGGCAATAATCCGCTGGAGCGCAGCAACGACGCGATCGGCGGCAACAGCGGCGCCGGCGGTGCGCAAAACGGCGGTCTGGGTAACAATCAGGGGCTGGGCGGCGGACAACAGGGTCAGAATGGCCTGGGCGATATTCTGACTAAATTGATGGATATCCTCATGCCGAAAAACGGCGCGCAGGGCGGTCAGGGACTGCAAGGCAACGGACAGGGTGGCGGTACGAGCGGCAACGGCGGACTTTCCGGCGCGCCGGGCGCGGGCGGCGCCCAGGGAGCCGGTGGAGCACAGGGCACAGGCGGCACATCCGACCTGGAAGGTCTTGGCAAATCGCTGCTGCAGGATAGCGGCGAAAGCGCGCTCAGCAACGGCATCTCCCCTACCCAGGATGGCGGCGGCCAAATCAGCGACAATCCGCTGCTGAAAATCCTGATGGCGCTGATCGCCATGCTGATGGAAAACCAGAAAAACCAATTTGGTCAGCCGCAGGATGGCGCGGCCGGCAATAACGGCGGCAGCGCAGCTCCATCGGTTGGTGGTGGTGCCGGTGGCGGTGCAGCGCCGTCAGTGGGCGGCGGTGCCGGTGGTGGCGCAGCACCGTCAGTAGGCGGTGCCGGTGGTGGCGCAGCGCCGTCGGTGGGCGGTGGTGCCGGTGGCGGTGCAGCACCGTCAGTGGGCGGTGGCGCCGGTGGTGGTGCAGCGCCGTCAGTGGGCGGCGGCGCCGGTGGTGGTGCAGCGCCGTCAGTGGGCGGTGGTGCCGGTGGTGGTGCAGCGCCGTCAGTGGGCGGTGGCTCCACGCCAACCGTCGGTGGGGGTAATGCCACCAGCGCGGCAGGCGATACCAACAGCGCAGCATCCACCGGTAGCGCCGGTAAAGCAGGTCCGGTGTCTTTCCCCACCGCGGATAATGCCAACGCTATCGTAGTCAATGAGCCGATCAAGGTTGGTCCGGGAGAAGTGTTTGACGGTAAAGGTAAAACCTACGTTGCCGGCCCGGCATTAGGCGATGGCGGCCAGAAAGAAGGCCAGAAACCGCTGTTTGAAGTAGCTGACGGCGGTTCCGTCAAAAATGTGATTTTCGGCAACAACGCGGCTGACGGTATCCACCTGCACGGCGACGCCAAAATCGACAACGTACACTGGACCAACGTCGGTGAAGACGCGCTGACGGTGAAGAGCAACACCGGCAAACCGGCCAACGTCTCCATCACCAACAGCAGCGCACAGGGCGCCTCTGATAAGGTGTTCCAGTTGAATGCCGACGCTAACTTCAACGTCGATAACTTCAAGGCGAAAGATTTCGGTACCTTCGTTCGCACCAATGGCGGTCAGCAGGGTAACTGGAACCTCAACCTGAGCAACATCGATGCACAGAACGGCAAGTTCTCGTTTGTGAAAAGCGACAGCGAAGGGCTGAACGTGAAGGTTAACAACGCCAATCTGGATAACGTCAACAATCACTACAAAGTCCCCAAATCCACCAACCTGCAAGTAAGCTGA
Protein sequence:
MADISITLSIPNAGLQGGLGGLGGADRTSNSGLGNNGLSGNKSSSQDTKLLEALAIVLTALLSNNGGTQGSGNNPLERSNDAIGGNSGAGGAQNGGLGNNQGLGGGQQGQNGLGDILTKLMDILMPKNGAQGGQGLQGNGQGGGTSGNGGLSGAPGAGGAQGAGGAQGTGGTSDLEGLGKSLLQDSGESALSNGISPTQDGGGQISDNPLLKILMALIAMLMENQKNQFGQPQDGAAGNNGGSAAPSVGGGAGGGAAPSVGGGAGGGAAPSVGGAGGGAAPSVGGGAGGGAAPSVGGGAGGGAAPSVGGGAGGGAAPSVGGGAGGGAAPSVGGGSTPTVGGGNATSAAGDTNSAASTGSAGKAGPVSFPTADNANAIVVNEPIKVGPGEVFDGKGKTYVAGPALGDGGQKEGQKPLFEVADGGSVKNVIFGNNAADGIHLHGDAKIDNVHWTNVGEDALTVKSNTGKPANVSITNSSAQGASDKVFQLNADANFNVDNFKAKDFGTFVRTNGGQQGNWNLNLSNIDAQNGKFSFVKSDSEGLNVKVNNANLDNVNNHYKVPKSTNLQVS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
53503 569 4.9 -0.291 22.67
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.