Effector profile
| PlantPEAD ID: PlantPEAD06332 | Uniprot ID: D2BZU9 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 204038 | Pathogen type: Bacteria |
| Species: Dickeya dadantii | Strain: strain Ech586 | Other name: |
| Gene name: | NCBI Gene ID: CP001836 | |
| Entry name: D2BZU9_DICZ5 | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGTGTATTTGCAGCGTGGTGGATTTAGGCACTTTGTAGTGATTGTTGACGTTATCCAGACTGGCGTTATTGACGTTGACTTTCAGCCCTTCGCTATCACTTTTGACGAAGGAGAACTTGCCGTTCTGGGCATCGATATTGCTCAGGTTGATGTTCCAGTTACCCTGTTGACCACCGTTGGTGCGAACAAACGTACCGAAATCTTTCACTTTGAAGTTATTGACGCTGAAATTGGCATCGGCATTGAGCTGGAATACCTTGTCAGCTGCGCCCTGTGCACTGCTGTTGGTGATAGAAACATTGGCCGGTTTACCCGTGTTGCTTTTCACCGTCAGTGCATCTTCGCCAACGTTAGTCCAGTGCACGTTATCGATTTTGGCATCGCCGTGCAGATGGATGCCGTCGGCGGCGTTGTTGCCAAAAATCACATTCTTGACTGAACCGCCGTCAGCGACTTCAAACAGGGGTTTTTGTCCTTCCTTCTGACCACCATCACCTAATGCCGGACCGGCAACATAGGTTTTACCTTTGCCGTCGAAGACCTCACCCGGGCCGACTTTGATTGGTTCATTCACAACGATAGCATTAGCGTTATCCGCCGTGGGAAAGGACACCGGGCCTGATTTACCTGAACCACTGGTGGGTACAGAACCGGTGGTATCACCTGGTGTGACGCCAGGTGTATTCCCCGTCGCGTTGCTGTTCGCCACATTATTGCTCCTCGCGTTGTTACCAACAGAAGGGGCTGCTCCGCCGTTAGCGCCATTGGCAGGGAGGGCGCTGCCCCTATCAGCCTGCGGTTGGGTGTGCTGATTTTTCTGGTTTTCCATCAGCATCGCTATCAGTGACAGCAGCAGTTTCGATAGCGGATCCTCGCCGATTTGGCCGCCGCCATCCTGTGTGGGAGAGATGCTATTACCGAGCGCGCTTTCACCGGCATCCTGTAGTAATGATTTGCTGAGATTCTCCAGATTGGATGTGCTGGCCGAGGCCGGAGTTCCACGCGAAGTCTGCGCGCCGGAAGGCCCGTTATTGCTCAATCCGTTATTCGTTATGCGGTCTGCGCCGCCAACACCGTTCGTAAGGCCCACGCTGGGGATGCGAAGCGTGATGCTGATATCTGACAT
Protein sequence:
MSDISITLRIPSVGLTNGVGGADRITNNGLSNNGPSGAQTSRGTPASASTSNLENLSKSLLQDAGESALGNSISPTQDGGGQIGEDPLSKLLLSLIAMLMENQKNQHTQPQADRGSALPANGANGGAAPSVGNNARSNNVANSNATGNTPGVTPGDTTGSVPTSGSGKSGPVSFPTADNANAIVVNEPIKVGPGEVFDGKGKTYVAGPALGDGGQKEGQKPLFEVADGGSVKNVIFGNNAADGIHLHGDAKIDNVHWTNVGEDALTVKSNTGKPANVSITNSSAQGAADKVFQLNADANFSVNNFKVKDFGTFVRTNGGQQGNWNINLSNIDAQNGKFSFVKSDSEGLKVNVNNASLDNVNNHYKVPKSTTLQIH
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38195.8 | 375 | 5.87 | -0.469 | 14.6 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG: ddc:Dd586_2002
PRINTS: