Effector profile
PlantPEAD ID: PlantPEAD06395 Uniprot ID: A0A0D5CN74 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: subsp. insidiosus strain R1-1 Other name:
Gene name: NCBI Gene ID: CP011046
Entry name: A0A0D5CN74_9MICO Protein name: Pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGCCCCCAGTTCCCACGACCCAACGTCATCACCTCGTCACGAGACCTTGGTTGGCTGTGCTCGTCGTCCTCGTTGCCGTCGGAGGCATCGCGTCGGCGCCCTCGTCCTCGGCTCACGCTGCAGGGCTCCCCGCGCAGGGATCATCCATCTCGACCTTGCCGGCCTTCCCGGCACCCACGTCGGTCAAGCCGGCACGAGCGACGCCGTATGAAGTGCCCGCCGGTCAAACCGTTGACTACGGCAACGCGGAGCTCAACGGGTCAACGTCCGGGCGCGGCGAGTTCCAGCAACCGGTCATCCTCGTCCACCCGGGAGGGACGGTGAAGAACGTGATCATCGGGCCGCTGGCTGCCGATGGTATCCACTGCGAAGCCTCCTGCACCATCGTGAACATGTGGTCAAGTCACGTCGGCGAGGACGCCGTGACCCTGGTCGACGGGTCACCGGCGTCTTCCGTCGTCACCATCCAGGGCGGAGGCGTCCAGCACGCATACGACCAGGTCGTGCAGATGGATGGCGCCGGAACGGTCCGGATCTCCCGCTTCGCCGCGTCGGACATCGGCTCCTTCGTACGATCCTGCGGTGACTGCCCGCACCAGTACCCGCGGCACATCGTGGTCAGCGACGTCTTCATCGACGGCGGCCGCTACAAGGTCGCCGGCGTCAATCAGAACTTCGGCGACACCGCCAAGCTCGACCACGTCACCATCCGTGGAACGCGCATGCAGGTCTGCGACAGGACCATCGGGGGTCGCGGCACTCCGGCGAAGGAGGTGCCCGGCGGGAGCGGAGACCCCTATCCGGGTGTGTGCGACTTCAGCTACGCCACCATCCTGTTCGAACACGGTTGA
Protein sequence:
MPPVPTTQRHHLVTRPWLAVLVVLVAVGGIASAPSSSAHAAGLPAQGSSISTLPAFPAPTSVKPARATPYEVPAGQTVDYGNAELNGSTSGRGEFQQPVILVHPGGTVKNVIIGPLAADGIHCEASCTIVNMWSSHVGEDAVTLVDGSPASSVVTIQGGGVQHAYDQVVQMDGAGTVRISRFAASDIGSFVRSCGDCPHQYPRHIVVSDVFIDGGRYKVAGVNQNFGDTAKLDHVTIRGTRMQVCDRTIGGRGTPAKEVPGGSGDPYPGVCDFSYATILFEHG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
29288 283 6.23 0.016 35.98
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.