Effector profile
PlantPEAD ID: PlantPEAD06396 Uniprot ID: A0A0M4HVE5 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 1874630 Pathogen type: Bacteria
Species: Clavibacter capsici Strain: 1106 Other name:
Gene name: NCBI Gene ID: CP048050
Entry name: A0A0M4HVE5_9MICO Protein name: Pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGCTCGTACTCGTCTCTGCCCGACGGCACCAGCTCCTCATGAGAGCTTGGGCGGCCGTGCTCGTCGCCCTCCTCGCTATCGCAGGCACAGCCTCCGATTCCGCTACCTCGGCCCACGCTGCAGGACTCCCCCCGCAGGGGTCATCCATCTCAAGCGTGCCGGCGTTCCCCGCACCCACGTCAGTCAAGCCGCCACGAGCGACCCCGTACGAGGTGCCTGCCGGTCAAACTGTCGACTACGCCAATGCGCAGCTCAACGGGTCAACGTCCGGGCGTGGCGAGTTCCAGCAACCGGTCATCCTCGTCCACCCGCTAGGAACCGTGAAGAACGTGATCATCGGGTTGCTCGCTGCCGACGGCATCCACTGCGAAGCCTCTTGCACGATCGTGAACATGTGGTCAAGCCACGTCGGGGAAGACGCCGTGACCCTACTTGACGGATCTCCCGCATCCTCCGTCGTCACCATTCAAGGCGGAGGCGTGCAGCACGCGTACGACAAGGTCGTCCAGATGGATGGCGCGGGGACGGTCCGGATCTCGCACTTCGCCGCCTCCGACATCGGCTCCCTCGTCCGCTCCTGCGGTGACTGCCCGCACCAATATCCCCGGCACATCGTGGTCAGCGACGTCTTCATCGACGGTGGCCGCTACAAAGTCACCGGCGTCAACCAGAACTTCGGCGACACAGCCAAGCTCGATCATGTCACCATCCGCGGAACGCGGATGCAAGTCTGTGACTGGACTATTGGGGGTCGCGGCAGTCCGGCGAAGGAAGTGCCCGGAGGGAGCGGAGGCCCGTACCCGGGTGTGTGCGACTTCAGCTACGCCACCATCCTGTTCGAGCACGGACAAGGTGCGAGCATCGACTTACGAAAATTGTGGGTTACAAGACGCAGGCAGCGCTGA
Protein sequence:
MLVLVSARRHQLLMRAWAAVLVALLAIAGTASDSATSAHAAGLPPQGSSISSVPAFPAPTSVKPPRATPYEVPAGQTVDYANAQLNGSTSGRGEFQQPVILVHPLGTVKNVIIGLLAADGIHCEASCTIVNMWSSHVGEDAVTLLDGSPASSVVTIQGGGVQHAYDKVVQMDGAGTVRISHFAASDIGSLVRSCGDCPHQYPRHIVVSDVFIDGGRYKVTGVNQNFGDTAKLDHVTIRGTRMQVCDWTIGGRGSPAKEVPGGSGGPYPGVCDFSYATILFEHGQGASIDLRKLWVTRRRQR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
31586.9 301 8.23 0.026 36.98
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.