Effector profile
PlantPEAD ID: PlantPEAD06401 Uniprot ID: A0A399SS90 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: subsp. insidiosus strain CFBP 6488 Other name:
Gene name: NCBI Gene ID: QWEA01000004
Entry name: A0A399SS90_9MICO Protein name: Pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGCCCCCAGTTCCCACGACCCAACGTCATCACCTCGTCACGAGACCTTGGTTGGCTGTGCTCGTCGTCCTCGTTGCCGTCGGAGGCATCGCGTCGGCGCCCTCGTCCTCGGCTCACGCTGCAGGGCTCCCCGCGCAGGGATCATCCATCTCGACCTTGCCGGCCTTCCCGGCACCCACGTCGGTCAAGCCGGCACGAGCGACGCCGTATGAAGTGCCCGCCGGTCAAACCGTTGACTACGGCAACGCGGAGCTCAACGGGTCAACGTCCGGGCGCGGCGAGTTCCAGCAACCGGTCATCCTCGTCCACCCGGGAGGGACGGTGAAGAACGTGATCATCGGGCCGCTGGCTGCCGATGGTATCCACTGCGAAGCCTCCTGCACCATCGTGAACATGTGGTCAAGTCACGTCGGCGAGGACGCCGTGACCCTGGTCGACGGGTCACCGGCGTCTTCCGTCGTCACCATCCAGGGCGGAGGCGTCCAGCACGCATACGACAAGGTCGTGCAGATGGATGGCGCCGGAACGGTCCGGATCTCCCGCTTCGCCGCGTCGGACATCGGCTCCTTCGTACGATCCTGCGGTGACTGCCCGCACCAGTACCCGCGGCACATCGTGGTCAGCGACGTCTTCATCGACGGCGGCCGCTACAAGGTCGCCGGCGTCAATCAGAACTTCGGCGACACCGCCAAGCTCGACCACGTCACCATCCGTGGAACGCGCATGCAGGTCTGCGACAGGATCATCGGGGGTCGCGGCACTCCGGCGAAGGAGGTGCCCGGCGGGAGCGGAGACCCCTATCCGGGTGTGTGCGACTTCAGCTACGCCACCATCCTGTTCGAACACGGTTGA
Protein sequence:
MPPVPTTQRHHLVTRPWLAVLVVLVAVGGIASAPSSSAHAAGLPAQGSSISTLPAFPAPTSVKPARATPYEVPAGQTVDYGNAELNGSTSGRGEFQQPVILVHPGGTVKNVIIGPLAADGIHCEASCTIVNMWSSHVGEDAVTLVDGSPASSVVTIQGGGVQHAYDKVVQMDGAGTVRISRFAASDIGSFVRSCGDCPHQYPRHIVVSDVFIDGGRYKVAGVNQNFGDTAKLDHVTIRGTRMQVCDRIIGGRGTPAKEVPGGSGDPYPGVCDFSYATILFEHG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
29300.1 283 6.39 0.033 35.64
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.