Effector profile
PlantPEAD ID: PlantPEAD06409 Uniprot ID: A5CLY6 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: subsp. michiganensis strain NCPPB 382 Other name:
Gene name: PelA2 NCBI Gene ID: AM711867
Entry name: A5CLY6_CLAM3 Protein name: Pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGCCCCCACTCCTCCCTGCCCGACGTCATCACCTAGCCACGAGACCCTGGGCGGTTGCGCTCGTCGTCCTCATCGCTATCGGAGGCGTCGCTGCTGTGCCCGCATCCTCGGCTCACGCAGCAGGGCTACCCGCGCAGGGATCAACCATCTCGACCCTCCCGGCGTTTCCCGCACCCACATCAGTCAAGCCGCCACGAGCAACCCCATACGAAGTGCCCGCGGGTCAAACCGTCGACTACAACAACGCGGAACTCAACGGTTCGACGTCAGGGCGTGGCGAGTTCCAGCAACCGGTCATCCTCGTCCACCCGGGAGGAACGGTGAAGAACGTGATCATCGGTCCGCTCGCAGCCGACGGCATCCACTGCGAAGCATCCTGCACCATCGAGAACATGTACTCGAGTCACGTCGGGGAGGACGCCGTGACCCTCCTCGACGGATCCCCGACGCCCTCCGTCGTCACCATCCAGGGCGGAGGCGTCCAGCACGCGTACGACAAGGTCGTCCAGATGGATGGCGCCGGCACTGTCCGGATCATGCACTTCGCCGCGTCCGACATCGGATCTCTTGTGCGTTCCTGCGGGAACTGCCCGCATCAGTACCCCCGCCACATCGTGGTCAGCGACGTCTTCATCGACGGTGGCCGTTACAAGGTCGCCGGCGTCAACCAGAACTTCGGCGACACAGCCAAGCTCGACCACATCACCATCCGCGGAACGCGCATGCAGGTCTGCGACAGGACCATCGGTGGCCGCGGCACGCCCGCCAAGGAGGTACCCGGAGGGAGCGGAGACCCCTACGCGGGGGTGTGCGACTTCAGTTACGCCACCATCCTGTTCGAGCACGGATGA
Protein sequence:
MPPLLPARRHHLATRPWAVALVVLIAIGGVAAVPASSAHAAGLPAQGSTISTLPAFPAPTSVKPPRATPYEVPAGQTVDYNNAELNGSTSGRGEFQQPVILVHPGGTVKNVIIGPLAADGIHCEASCTIENMYSSHVGEDAVTLLDGSPTPSVVTIQGGGVQHAYDKVVQMDGAGTVRIMHFAASDIGSLVRSCGNCPHQYPRHIVVSDVFIDGGRYKVAGVNQNFGDTAKLDHITIRGTRMQVCDRTIGGRGTPAKEVPGGSGDPYAGVCDFSYATILFEHG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
29388.3 283 6.44 0.013 42.21
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.