Effector profile
PlantPEAD ID: PlantPEAD06410 Uniprot ID: B0RG35 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 28447 Pathogen type: Bacteria
Species: Clavibacter michiganensis Strain: subsp. sepedonicus strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1 Other name:
Gene name: NCBI Gene ID: AM849034
Entry name: B0RG35_CLAMS Protein name: Pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGCCCCCTCCCTTCCCAGCATCCGCGCGCCTGCAGGCGACCCGCCCCTTCCGCGGGCGGCTCGGTGCCGTCGCCGCAGTGACCGCAGTGGCCCTCCTCGCGCTGGGGCTATCGCTCCCGCAGACCGCTCCCGCGCAGGCAGCCGGGCTGCCTGCGCGTGGGTCCTCCATCTCGGACATGCCTGCCTTCCCCACGCCTACCCACGTCGCCCCAGCGCAGAGCATGCCCTTCCTGGTGAAGGCCGGTCAGACGGTCGACTTCCACAACCAGGAGCTCAACGCCTCCACGAACGGGCACGGGGAGTTCCAGGAGCCCGTGGTGCTCATCGAGCCGGGTGGGATAGCCGAGAACCTCATCATCGGCCCGCTGGCAGGGGACGGCATCCACTGCCAGGCGTCGTGCACCCTCATCAACATCTGGTGGCCGCACGTAGGCGAGGACGCCGTGACGCTGCTCGACGGATCGCCGGCATCGTCCGTCGTCACGATCCGCGGCGGTGCCGTGGCGCATGCCTACGACAAGGTCGTGCAGCTGGACGGCGCGGGGACGGCGCGCTTCTCGGACTTCGCGGCGAGCGACATCGGAACGCTGGCGCGCTCCTGCGGCAACTGCCCGAATCAGTACACCCGGCACATCGTCATCAGCAACGTCTTCATCACGGGCGGCAAGTACAAGGTGGCGGGCGTCAATCAGAACTTCGGCGACACCGCCACGCTCGATCACGTCACCATCCATGGCGTGCACATGCAGGTCTGCGACCGCACCATCGGCGGCCGGGGTACCGCGGCCAAGCCGGTTCCGGGAGCAGGGGGTCCGTTCCCGCCGTACTGCGTGTTCGATCCCGGCACGATCCTCTACTCCTAG
Protein sequence:
MPPPFPASARLQATRPFRGRLGAVAAVTAVALLALGLSLPQTAPAQAAGLPARGSSISDMPAFPTPTHVAPAQSMPFLVKAGQTVDFHNQELNASTNGHGEFQEPVVLIEPGGIAENLIIGPLAGDGIHCQASCTLINIWWPHVGEDAVTLLDGSPASSVVTIRGGAVAHAYDKVVQLDGAGTARFSDFAASDIGTLARSCGNCPNQYTRHIVISNVFITGGKYKVAGVNQNFGDTATLDHVTIHGVHMQVCDRTIGGRGTAAKPVPGAGGPFPPYCVFDPGTILYS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
29604.7 287 6.34 0.135 42.03
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.