Effector profile
| PlantPEAD ID: PlantPEAD06422 | Uniprot ID: W6Y016 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5017 | Pathogen type: Fungi |
| Species: Cochliobolus carbonum | Strain: strain 26-R-13 | Other name: Maize leaf spot fungus,Bipolaris zeicola |
| Gene name: | NCBI Gene ID: KI964667 | |
| Entry name: W6Y016_COCC2 | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGATTTGCCGGACTCGTCGCTATCATTACAGCTCTCCTTCCTACAGCTCTTGCCTGCAATGGATACACTGGAGGTGTACCTGCTGCTGTCGGCACCAAGACCAACAGCAAAGTCATTGAGATCGCGGCTGGCCAGACCTTTGACGGTAAATGGTACAGGTATGATCGTGGTAGCGGTGCCTGTTCCGGTCAGACCGAGGGAGGAGCTTCGGACGCTGTATTCTTGCTGAAGGAAGGTGCCACTCTCCGCAACGTAATCATTGGAAAGAATCAGGCCGAGGGTGTCCATTGCCAGGGCCATTGCCGTCTCGAGTATGTCTGGTTCGAGGATGTCTGTGAGGACGCTATCTCCATCAAGTCGGACAAGCCGGGCAAGGAATCTTGGATCATTGGTGGCGGTGCCTACCACGCCTCAGACAAGGTTGTTCAGCACAACGGCTGCGGTACCGTTAACATTATCAACTTTTACGTCAACAACTACGGCAAGCTTTACCGCTCTTGCGGAAACTGCTCCACGCAATGCAAGCGTAACGTTTACATCGAGGGTGTTACTGCCGTCAAAGGAAACGAGTTGGCCGGTATTAACAGCAACTACGGCGACACTGCTACTCTAAGAAACGTCTGCTCTGACGCAAAAGTCAAATGCCAGATGTATACTGGTTGTGCTGGTGGCTGCGAGCCCCAGAAGGCTGGTGTTTGCTCTGGCTAA
Protein sequence:
MRFAGLVAIITALLPTALACNGYTGGVPAAVGTKTNSKVIEIAAGQTFDGKWYRYDRGSGACSGQTEGGASDAVFLLKEGATLRNVIIGKNQAEGVHCQGHCRLEYVWFEDVCEDAISIKSDKPGKESWIIGGGAYHASDKVVQHNGCGTVNIINFYVNNYGKLYRSCGNCSTQCKRNVYIEGVTAVKGNELAGINSNYGDTATLRNVCSDAKVKCQMYTGCAGGCEPQKAGVCSG
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24893.1 | 236 | 8.15 | -0.152 | 24.14 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG: bze:COCCADRAFT_101550
PRINTS: