Effector profile
| PlantPEAD ID: PlantPEAD06487 | Uniprot ID: T0K0R1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 474922 | Pathogen type: Fungi |
| Species: Colletotrichum gloeosporioides | Strain: strain Cg-14 | Other name: Glomerella cingulataļ¼Glomerella rufomaculans-vaccinii |
| Gene name: | NCBI Gene ID: AMYD01003426 | |
| Entry name: T0K0R1_COLGC | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTACTTCTCAAAGGCAGGTGTCGTGGCTCTGCTGGCGGCTTTGCCGTCCACTCTGGCTTGTCTCGGCTACGAGGGTGGTCTTCCCACTCCTACTAGCACCAAGACCAACAGCAAAGTCATCGAGGTGGCAGCTGGTGCCACATTCGATGGTGGCTGGGCTAAGTATGACCGTGGCTCGGGTGCCTGCAACGATCAGGCCGAAGGAGGTGACGCCGATGCCGTTTTTCTGCTCCGCAGAGGCGCAACCTTGAAGAACGTCATCATTGGAAAGAACCAGGCTGAAGGTGTGCACTGTGACGGACCCTGCACCCTCGAGTTTGTTTGGTTCGAGGATGTCTGCGAAGACGCCATCACTGTCAAGAATGACAAGAGCGGCGACCATACTTGGATAATCGGCGGTGGCGCCTACAAGGCTTCGGACAAGATTGTCCAGCACAACGGCTGTGGCACTGTGAACATCATTAACTTCTACGCCAACACATATGGCAAGTTGTACCGCTCTTGCGGAAACTGCAAGCGCAATGTCTATGTCGAGGGAACCACCGCGTACAACGGCGGCGAGATTGTCGGCATCAACTCGAACTACGGCGACACCGCCACCCTCAAGAACGTCTGCACAGACGCAAAGGTCAAGTGTCAGATGTACAACGGCTGTGCCGGTGGCTGCGAGCCTACCAAGTCGGGTGTTTGCTCTGGTTAA
Protein sequence:
MYFSKAGVVALLAALPSTLACLGYEGGLPTPTSTKTNSKVIEVAAGATFDGGWAKYDRGSGACNDQAEGGDADAVFLLRRGATLKNVIIGKNQAEGVHCDGPCTLEFVWFEDVCEDAITVKNDKSGDHTWIIGGGAYKASDKIVQHNGCGTVNIINFYANTYGKLYRSCGNCKRNVYVEGTTAYNGGEIVGINSNYGDTATLKNVCTDAKVKCQMYNGCAGGCEPTKSGVCSG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24394.4 | 233 | 5.93 | -0.169 | 28.97 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: