Effector profile
| PlantPEAD ID: PlantPEAD06506 | Uniprot ID: A0A1B7YQV7 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 759273 | Pathogen type: Fungi |
| Species: Colletotrichum higginsianum | Strain: strain IMI 349063 | Other name: Crucifer anthracnose fungus |
| Gene name: | NCBI Gene ID: LTAN01000002 | |
| Entry name: A0A1B7YQV7_COLHI | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTACATCCGAAACAACCTCGTCGTCTTGGCCCTCTGCCTCTCCGTCCTCGCGTCTCCGGCTTCGAAGAGCGGCTCGCACAAGGGCTCTTCCAAGGGCGGCAAGCACAGCGGTTCCGGCGGGGCGCACAGCACGCACCCCGCGCACGCGCCCAAGAGCACCTCGACGCCGGGCTACGGGGCCGGCTCCGGGTCTGCCGCAGGAAACGGGACGACTTCCGGCGGTGGCGGCGGCGCCAACACGGAACTGCAGACGACATTCCCGACGCCCAAGGGCGCGCAGAACCTCGCGGCCGTCAAGACCATCGCGGCGGGCCAGTCGTTCGACGGCGGCATGCAGCTCTGGGACCGCAGCCCGAGCACGTGCAAGGGCCAGAGCGAGGGCGGCAACAAGGACGCCGTCTTCATCCTCGAGGAGGGGTCGACCCTCAGCAACGTCGTCATCGGGCCGAACAATGGCGAGGGGATCCATTGCTTGGGGAGCTGTACGCTCAACAACGTCTGGTTCCAAAAGGTGTGCGAGGACGCCGTCACCTTCAAGCAGCAGTCGGGCACCTCCTTCGTCAACGGCGGGGGCGCGCAGGACGCCGCGGACAAGGTGCTGCAGCACAACGGCAGCGGCACGGTGGCGGTGCGCAACTACTTCTGCAAGAACTGCAGCAAGCTGTACCGCAGCTGCGGCAACTGCAAGACGCAGACGGCGCGGCACGCGACGTTTGACAACATCCGGCTCGACGGCGGCAAGGTGCTCGCGGGCGTCAACGGCAACCTGGGCGACGTGGCCGAGGTCAGGGACTCGTGCGTGCTCGGGGCCGACGTGTGCGACAACTTTGAGGGCAACAGCAGCGGCGCCGAGCCGAAGCTGGTGAGCAAGGGGCCCGACGGCAAGGTCTGCGTCGCCACGAATGTGAAGACGACCGGGTGTTAG
Protein sequence:
MYIRNNLVVLALCLSVLASPASKSGSHKGSSKGGKHSGSGGAHSTHPAHAPKSTSTPGYGAGSGSAAGNGTTSGGGGGANTELQTTFPTPKGAQNLAAVKTIAAGQSFDGGMQLWDRSPSTCKGQSEGGNKDAVFILEEGSTLSNVVIGPNNGEGIHCLGSCTLNNVWFQKVCEDAVTFKQQSGTSFVNGGGAQDAADKVLQHNGSGTVAVRNYFCKNCSKLYRSCGNCKTQTARHATFDNIRLDGGKVLAGVNGNLGDVAEVRDSCVLGADVCDNFEGNSSGAEPKLVSKGPDGKVCVATNVKTTGC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 31134.5 | 308 | 8.53 | -0.319 | 35.24 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG: chig:CH63R_03147
PRINTS: