Effector profile
| PlantPEAD ID: PlantPEAD06541 | Uniprot ID: A0A4R8Q314 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1347390 | Pathogen type: Fungi |
| Species: Colletotrichum spinosum | Strain: CBS 515.97 | Other name: |
| Gene name: PlyF-3 | NCBI Gene ID: QAPG01000074 | |
| Entry name: A0A4R8Q314_9PEZI | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTCGCCAACGCCGGAACTCTCACCCTTGCTCTGCTGAGTGCTCTGCCCTCGACCCTGGCCTGTCTGGGCTGGGAGGGTGGTCTGCCCAAGGCCACTTCCACCAAGCAGATTTCTGCCCCCATCTACGTCAAGTCGGGCCAGGTCTTTGACGGCGGGTGGGCAAAGTACGACAGAAACCCGACATCGTGCAACGAGCAGGTAGAAGGCGGCGAGAAGGACACTGCCTTTGTCCTGGAGAAGGGCGCTACCCTGCGCAACGTCATCATTGGTAAGACTGCGGGCGAGGGCGTGTACTGCCTCGGCGGCGGGTGCAACATTGAGTTTGTCTGGTTCGAGGACGTTTGCGAGGATGCCATCTCCATTAAGGAAGACAAGGCCGGCGACGTTACCTGGATTGTCGGAGGAGGCGCCTTCAAGGCATCTGACAAGATCATCCAGCACAACGGCTGCGGAAAGGTGAACATCATCAACTTCTACGCCGAAGACTACGGCAAGGTCTACCGCTCGTGCGGAACTTGCCAGAAGTGTGCCCGCGAGGTTTACGTCGAAGGCGTCACGGCTCGCAAGGGAGGCGAAGTCGTCGGGATCACAAAGGCCAACGGCGACAGGGCCACTCTCGTCAACGTCTGCACCGACGCAAAGACTCCCTGCCAGAACTACAGCGGTCCCGGTGTCAAGGACGGCGCTTGCTGA
Protein sequence:
MLANAGTLTLALLSALPSTLACLGWEGGLPKATSTKQISAPIYVKSGQVFDGGWAKYDRNPTSCNEQVEGGEKDTAFVLEKGATLRNVIIGKTAGEGVYCLGGGCNIEFVWFEDVCEDAISIKEDKAGDVTWIVGGGAFKASDKIIQHNGCGKVNIINFYAEDYGKVYRSCGTCQKCAREVYVEGVTARKGGEVVGITKANGDRATLVNVCTDAKTPCQNYSGPGVKDGAC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24299.6 | 231 | 5.58 | -0.114 | 29.71 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: