Effector profile
| PlantPEAD ID: PlantPEAD06565 | Uniprot ID: N4VC22 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5465 | Pathogen type: Fungi |
| Species: Colletotrichum orbiculare | Strain: strain 104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422 | Other name: Cucumber anthracnose fungus, Colletotrichum lagenarium |
| Gene name: PlyF-4 | NCBI Gene ID: AMCV02000018 | |
| Entry name: N4VC22_COLOR | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTCGCCAACGCCGGAACTCTCACCCTTGCTCTGCTGAGCGCTCTGCCCTCGACCCTGGCCTGTCTGGGCTGGGAGGGTGGTCTGCCCAAGGCCACTTCCACCAAGCAGATTTCTGCCCCCATCTACGTCAAGTCGGGCCAGGTCTTTGACGGCGGGTGGGCAAAGTACGACAGAAGCCCGACATCGTGCAACGAGCAGGTAGAAGGCGGCGAGAAGGACACTGCCTTTGTCCTGGAGAAGGGTGCCACCTTGCGCAACGTCATCATTGGCAAGACTGCGGGCGAGGGCGTGTACTGCCTCGGCGGCGGCTGCAACATTGAGTTTGTCTGGTTCGAGGACGTTTGCGAGGATGCCATCTCCATCAAGGAAGACAAGGCCGGCGACGTTACCTGGATTGTCGGAGGAGGCGCCTTCAAGGCATCTGACAAGATCATCCAGCACAACGGCTGCGGAAAGGTGAACATCATCAACTTCTACGCCGAAGACTACGGCAAGGTCTACCGCTCGTGCGGAACTTGCCAGAAGTGCGCCCGCGAGGTTTACGTCGAAGGCGTCACGGCTCGCAAGGGAGGCGAAGTCGTCGGAATCACAAAGGCCAACGGCGACAAGGCCACTCTCGTCAACGTCTGCACCGACGCCAAGACTCCCTGCCAGAACTACAGTGGCCCCGGTGTCAAGGACGGCGCTTGCTGA
Protein sequence:
MLANAGTLTLALLSALPSTLACLGWEGGLPKATSTKQISAPIYVKSGQVFDGGWAKYDRSPTSCNEQVEGGEKDTAFVLEKGATLRNVIIGKTAGEGVYCLGGGCNIEFVWFEDVCEDAISIKEDKAGDVTWIVGGGAFKASDKIIQHNGCGKVNIINFYAEDYGKVYRSCGTCQKCAREVYVEGVTARKGGEVVGITKANGDKATLVNVCTDAKTPCQNYSGPGVKDGAC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24244.5 | 231 | 5.58 | -0.1 | 33.06 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: