Effector profile
| PlantPEAD ID: PlantPEAD06579 | Uniprot ID: A8NTC2 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5346 | Pathogen type: Fungi |
| Species: Coprinopsis cinerea | Strain: strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003 | Other name: Inky cap fungus，Hormographiella aspergillata |
| Gene name: | NCBI Gene ID: AACS02000004 | |
| Entry name: A8NTC2_COPC7 | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTTCACTGTACTTGCGTTGACAACCTACTTCCTGGGCGCCCTGGCCAATCCAATTGAGAAGCGCGCCGCTACGAATGTCTTCCCCAACCCTCCAAGCACATCGTCCTTGAGTGCGCCAATCAGGATTCGCGCAGGGACTACCTTCACTCCTCCGGTGGCCTATACAAGGTACGACCGGGGATGGGGTGCGTGTCAAGAGCAGAAAGAAGGCGGGCAAGCCGACGCTGTTTTCCTTCTCGAAGAAGGGGCGACTCTTCGTAATGTAGTCATCGGGCCGCACCAAATGGAAGGATCATGTCGACTCGAGAACGTATTCTTTGAGGATGTTTGTGAAGACGCCGTTACTATCAAGCAAAATGGTGGAACATCATACATTGTTGGCGGAGGGGCGAAGCACGCCACGGATAAAATCATTCAACACAACGGAGGCGGAAGGGTTATCATCGACTCGTTCTTTGCAGATGGGTTTGGTACATTCTATAGAAGCTGTGGAAACTGCAGGACGCAGCATGCTCGGCACGTTGAGGTCCTGAACTCCTGGGCCATCAACGGAAACAACCTAATTGGTGTAAACTCGAATTACGGAGACACCGCGACGATCCGCCAAACCCGTGTGTCGAATGTCAGGAATGTGTGCCAACGGTATATCGTTTTCCACCCATTCTCCGGTGATGAGGCCTGCTGA
Protein sequence:
MFTVLALTTYFLGALANPIEKRAATNVFPNPPSTSSLSAPIRIRAGTTFTPPVAYTRYDRGWGACQEQKEGGQADAVFLLEEGATLRNVVIGPHQMEGSCRLENVFFEDVCEDAVTIKQNGGTSYIVGGGAKHATDKIIQHNGGGRVIIDSFFADGFGTFYRSCGNCRTQHARHVEVLNSWAINGNNLIGVNSNYGDTATIRQTRVSNVRNVCQRYIVFHPFSGDEAC
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24814.8 | 228 | 6.99 | -0.205 | 31.94 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG: cci:CC1G_06278
PRINTS: