Effector profile
| PlantPEAD ID: PlantPEAD06591 | Uniprot ID: F0Q9G2 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 80867 | Pathogen type: Bacteria |
| Species: Paracidovorax avenae | Strain: strain ATCC 19860 / DSM 7227 / CCUG 15838 / JCM 20985 / LMG 2117 / NCPPB 1011 | Other name: Acidovorax avenae |
| Gene name: | NCBI Gene ID: CP002521 | |
| Entry name: F0Q9G2_PARA1 | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGACCGTCTGGATCGACTGGCGCACGCTGTGCGTGCCCTGCACGTTGGCGGGGTTGCCCGCCATCACGTTCACCGGCGTGCGGCCCCCGTCCACGTCGGTGTTGGCGATGTGCACGGTGGATTGCCGGGAGTCGAAGCGGAAGAGGAAGGATTTCAGGTTCTGCGCGGTGGAGTCGGCGATGTCCACATGCGCGGTGATCGGGTAGCCGCCGCGCGTCACGGCCAGTTGCCCGATCTGGTTCGCGTAGATGCCGCGCAGCTTCAGGTCGACGTCGCCGTTGATCTGGATCGCCTTGTCATGGCTGTTCTGGAACGACGAGTTCGTGATTTCCACGCGGGCCGGGCCCGGAGGGATGCTCTTGGCGGAATAGCCGGCGCGCTGCGCATCCACGGCCCGGTTCTCCGCGCCGTCCACGGTGATGAAGTCGTCGTCCGTCTGCAGGCCGTGCACGTTGTCGAGCTTGGCGTCGCCCAGCAGGTGGATGCCGTCGCCGCCCTTGAACTGGAGGTTCTTCACGGACGCACCCGGCTCCAGGATGAAGACCGGCAGATGCGTCTCCGCCGTGCCACCGCCGTTGAGCCCGGGCCCGGCGCTGAAGAGCCGGCCCTGGCCGTCGAAGGTCTGGCCGGCCTTCACGACGATGGGTTTGTTCACCTCCACCGTGCCCGTCTGCGCGCCGACCTGCATGTTCGCGGGCGGCTTCGCGGCATGGGCCGTGGTGGCCGGGGTGCCTGCGCCGCGCGGTGCGTGCGCCGTGCCGGCGTGGCCGGCCTCGGTGTGCGCCACGGCACGTTGCGTGGTGTGCGAGGGTGGCTGTGCCGTCCCGGCGGCATGCCCCGCGGCGCTGTCGCCGGAGCGGGACGACGGAGCGGCTCCCCCGCGCATGCGCTTCAGGAGGCCTTCGAGCAGGGTGGCGAGGGACTGCTGCAGCGCCTGGCTGCCGTGGTGCCGGGCCGCGGAGGCGGCCTGTTCCGATGCCGCGGCATGCCGTGCGGCCAGGGAGGACGAGAGAAAGGCGATGGGGTTCAT
Protein sequence:
MNPIAFLSSSLAARHAAASEQAASAARHHGSQALQQSLATLLEGLLKRMRGGAAPSSRSGDSAAGHAAGTAQPPSHTTQRAVAHTEAGHAGTAHAPRGAGTPATTAHAAKPPANMQVGAQTGTVEVNKPIVVKAGQTFDGQGRLFSAGPGLNGGGTAETHLPVFILEPGASVKNLQFKGGDGIHLLGDAKLDNVHGLQTDDDFITVDGAENRAVDAQRAGYSAKSIPPGPARVEITNSSFQNSHDKAIQINGDVDLKLRGIYANQIGQLAVTRGGYPITAHVDIADSTAQNLKSFLFRFDSRQSTVHIANTDVDGGRTPVNVMAGNPANVQGTHSVRQSIQTV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 35254.1 | 343 | 8.89 | -0.314 | 29.89 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG: aaa:Acav_0846
PRINTS: