Effector profile
| PlantPEAD ID: PlantPEAD06592 | Uniprot ID: A0A024GBC8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 65357 | Pathogen type: Oomycota |
| Species: Albugo candida | Strain: Ac Nc2 | Other name: |
| Gene name: | NCBI Gene ID: CAIX01000058 | |
| Entry name: A0A024GBC8_9STRA | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTGATGAAACAACTTCGTACACTCGGAATAGCTGTGTGTCTTGCAAATCAGTGCACGACCGATGCTGTTGCTCCAATGCCCACAGGAAATTGGCCAAAAAGCCAAGGAAATGTCAAGTATCCCGCACCCAAGGTCATTCCAGCAAAGACTGTATTCGATGGAGGAATGAAAACGTATGAGCGATCGGATATCTCCTGCAAGGAAAACCAAGAAGGCGGTAAATCTGGCGCTCTGTTTATATTGAAAGCTGGAGCTACCCTCCAGAACGTCATTGTCGGTCCTCGACAACAAGATGGCGTGCATTGCGAGGAACATGACTGCACCATTAAGAACGTTTGGTGGGCTGATGTATGTGAAGATGCCTTGTCGATCATTGGCGGCTCGGCTAACAGCGTCAGTAATGTCATCGGTGGTGGGGCGAAGTTGGCCAATGACAAGATCATTCAGCATAATGGTCCTGGTACCGTCAACATTGAAGGCTTTTATGCCGAAGATTTTGGAAAATTATATCGATCCTGCGGCAAATGCAAAACGCAGTATCCTCGTGCCGTGAAATTGACCAATATCTACGCAGTCGATCCAAAAGTGACTGTGGTGGCCGTGAATTCCAATTACAATGATAAAGCTACGCTTACTAATGTCAAAATCGATAAGGCGTCCAAGAACAAACCAGTGTGTGAATACACGAAAGGAAGCACCAATGCAGAACCAAGTGTGCTGGGGAAGGGTCCGTCTGGCTCTGTGTGCAACTACAAGACAAGCACCGTCACATATGTCTGA
Protein sequence:
MLMKQLRTLGIAVCLANQCTTDAVAPMPTGNWPKSQGNVKYPAPKVIPAKTVFDGGMKTYERSDISCKENQEGGKSGALFILKAGATLQNVIVGPRQQDGVHCEEHDCTIKNVWWADVCEDALSIIGGSANSVSNVIGGGAKLANDKIIQHNGPGTVNIEGFYAEDFGKLYRSCGKCKTQYPRAVKLTNIYAVDPKVTVVAVNSNYNDKATLTNVKIDKASKNKPVCEYTKGSTNAEPSVLGKGPSGSVCNYKTSTVTYV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 27772.7 | 260 | 8.9 | -0.301 | 31.67 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: