Effector profile
| PlantPEAD ID: PlantPEAD06680 | Uniprot ID: A0A833RML5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: KR_1_A1 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: | NCBI Gene ID: WSZM01001254 | |
| Entry name: A0A833RML5_PHYIN | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTAGATGATCTCCAGGTCCGCGTAAATATTGGTCAAGTTGAGGAAGCGCTGACGAGGATTGCTCTTGCAGTTACCGCATGAACGGTACAGCTTACCGAAATCTTGCGCAAAGAAACCATCGATAACAACGGTACCGTATCCGTTGTGCTGGACTACTTTGTCGTCCGCGTAACGAGCCCCACCACCGATGACCCTGGAGACACTGGAAGCATTTCCACCCTTGATGCTCAGGGCATCCTCGCACACGTCCTCCCACCACACGTTCTCGATCGTGCAGTCCGACATCTCACAGTGGACGCCCTCCATTTGATTCGTGCCGATGATAACGTTCTTGAGCGTGGCACTGGGTTCGACCTCGAAGACAGCATTCGATGATCCGTTGCTCTCGGTCTGTCCGAGGCAGGTGATGTCCGAGCGGTCGTAGGTTTTCATGCCACCGTCAAACACTTCACCCGCTTTCACGACGTAGACTTCAGTGTAGCTGACATTGCCTTGACTAGTAGGCCAAGTGCCATCCGGGACAGGAGCACCGAACGCAACTGCGATGCCGATCGCAAGGGTAGCGAAGAACTGAAGCAT
Protein sequence:
MLQFFATLAIGIAVAFGAPVPDGTWPTSQGNVSYTEVYVVKAGEVFDGGMKTYDRSDITCLGQTESNGSSNAVFEVEPSATLKNVIIGTNQMEGVHCEMSDCTIENVWWEDVCEDALSIKGGNASSVSRVIGGGARYADDKVVQHNGYGTVVIDGFFAQDFGKLYRSCGNCKSNPRQRFLNLTNIYADLEII
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20734.2 | 192 | 4.53 | -0.076 | 34.62 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: