Effector profile
| PlantPEAD ID: PlantPEAD06739 | Uniprot ID: F0Q3Q1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80867 | Pathogen type: Bacteria |
| Species: Paracidovorax avenae | Strain: strain ATCC 19860 / DSM 7227 / CCUG 15838 / JCM 20985 / LMG 2117 / NCPPB 1011 | Other name: Acidovorax avenae |
| Gene name: | NCBI Gene ID: CP002521 | |
| Entry name: F0Q3Q1_PARA1 | Protein name: Type III secretion system effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCACGTCCTGGATTTCTGGACGATGTTGTCGATGAACGAGGCATTGCGAGCCAACACCCGGTCCACCAGGTCGGCGTCCGGCATCCAGCTGCATCCTGAAAGATGCCCCAAACCTTGGCGCAACGAAAGAAGCGATGCGGTGGATCTGCCAACGTCGAGTGCGGCATACCAGCGCTTCACCGCCGCCGCTTCGGGCGTGGCGTTCTGGTGCAGTGCTTCGCGCATGCAATCGACGACGGCCTCGTGCACCGGATCGAGACCTTTCGCATAACGGCTGTTCAGCACACTCCGGTCGAGCAGCACGTTCAGCGCCAGCCCGGGGTTCTCGATGACCTTTCCCCAGCCATGCCGCACCGGATCCTGCGAACTTGACGTGGCGTCTTTCTCCCGGTCGTAGCGGAACCCCGTGACATCGATGTTCACGACCTGGTGCCGGCCGTCTGCGCCAGGGACAACCAGCATGTTGTCCGGCCCCAGATCGGACGATTCCCCCAGGGTTAACCGGGTCAGCAGCGACATGAACAGTCCGTCCAGCCCTTGCTGTTGCAATGTCTCGCTCAGTGCCCGCCGGCCCGAGTGGAGATTGGCGGGATCGTTGATCCGTGCGACCAGTGCCTGCGCCCGTGCGACCTCATCCGGTCCTGCCCGGTTTCCGGCAGCGGCTGCCTTGATGAGCGACGCAGCACGTTTTGCGTCCGCGAGCGAAACGCCATCCGGAAGAAAAGGCTGGGTCAGGAAGACATCGAGCGGCGTGGCGTCCGAAACGAGCCGCGAAGCGATCAATACATTGTTCTCCACGGTCAGCAGGGACGAGTCCGGGATATGGTGCTTTGCGAGATAGGTACCCTGCAAGGCATTGACCATGTCCTGTGCGGCCGCCACGTTGATGGCATCGAAAATGACCGGTATGCCGAGGGGATTTCTCAACGTTGGATCTGCGCGGACGAGGCTCGCATGAATGTCGCTGACATCGTTGATGTCCAGCTCGTCCACCTTCGCTTTCTCCGCCAGTTTTCTTCCTTTCCCGCTTTGGAGAAAGCCATGGAAGGCATCTGTCAGCTCCCGTTCCAGGGCCCCTTTCGCGGTGCCACCCTCCACAAGCCTGTCCCAGGCACTGACGATGTACCCCAGGCGCTTGTTCGCTTCGGCAATTTGCCCTTTCGCACAAAGTGCAACCGCCTGGCCCAACAAGCTTCGCGAGATTCCTGTCTTGACAAGATGCTCCTCGCCATCGATCTTCCCGATCATTCCGACGTCGCTGCCTCCCAACGCCTTCTTCGAGCGTGAGAAGACAACGCCATTTCCGGAGACTCCCGATGCGGCCTGGGCGTCGCCTGGGGTGCTGTGGGTGGACAGGAACGACAGGTGTTTGATGATCAAGAACAT
Protein sequence:
MFLIIKHLSFLSTHSTPGDAQAASGVSGNGVVFSRSKKALGGSDVGMIGKIDGEEHLVKTGISRSLLGQAVALCAKGQIAEANKRLGYIVSAWDRLVEGGTAKGALERELTDAFHGFLQSGKGRKLAEKAKVDELDINDVSDIHASLVRADPTLRNPLGIPVIFDAINVAAAQDMVNALQGTYLAKHHIPDSSLLTVENNVLIASRLVSDATPLDVFLTQPFLPDGVSLADAKRAASLIKAAAAGNRAGPDEVARAQALVARINDPANLHSGRRALSETLQQQGLDGLFMSLLTRLTLGESSDLGPDNMLVVPGADGRHQVVNIDVTGFRYDREKDATSSSQDPVRHGWGKVIENPGLALNVLLDRSVLNSRYAKGLDPVHEAVVDCMREALHQNATPEAAAVKRWYAALDVGRSTASLLSLRQGLGHLSGCSWMPDADLVDRVLARNASFIDNIVQKSRT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 49064.8 | 461 | 6.51 | -0.077 | 34.75 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: aaa:Acav_0370
PRINTS: