Effector profile
| PlantPEAD ID: PlantPEAD06740 | Uniprot ID: F0QA65 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 80867 | Pathogen type: Bacteria |
| Species: Paracidovorax avenae | Strain: strain ATCC 19860 / DSM 7227 / CCUG 15838 / JCM 20985 / LMG 2117 / NCPPB 1011 | Other name: Acidovorax avenae |
| Gene name: | NCBI Gene ID: CP002521 | |
| Entry name: F0QA65_PARA1 | Protein name: Cysteine protease domain protein, YopT-type | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGGAACGAGACAAGCGCTCCTGATCCGCTTTTACGTAGTCCACCAAAAAGTCGAGTGGCGTACTCGAACCGGTATTGTTCGGCCGGACATTGGTCAATGCCCAGTCGAAGGACACATCGCTTTTCAGCCTGTACTTTTCTCGCAACGTTCGCAGGAACTGGGCTGCGTCCTCGGACTTGAATCGAAACTCCCCATGGTTCGGGTCGAAGAACGTGATCATGCCGTCTTCAGGATTTCGGTGCAGGCCCATTTCATGGCCGGTCGTCTTCCAGGCCTTATCTGTGCGATAGAAAATGAGGCTGGCATAGCCATCAATGCTCGCCATCGTGGCGGCTATTTTCGCCGCAGAACTCGTGCTTTTGATCGGCCGCATGTCCCTGGTGATTCCGTACAGCCCGTCGAGGTCTGCTCGCGCCTTCGTTTCCAGCGATCGTCCGAAGCCAGAGCCACGTCTCAAATGCTCGTGGTTCATGTGATATGCTTTTTGAAAAATGAGGGCGTGCTGCATGCCCTCGAACGACCCCACCGCGCTCAGTCTCGTATTGACGCTTCCATCGGGAGCGGCACAGTGGAGATTCATCCATATGGTGGAGAGTCCGGCGCACACCCCACCCGACCCTATTTTGTCGCTCCCGAACGCAGTCTTGAGACCCGTCGCTTGCACAAGTCCGTATTGAAGACTCGACTCGAAAAGGCTTTTATCGGAAGGAGGGCTGCATGCATGACGGCCAAACTTTTCCTTCAGGCGATTAAATATATCGGTGCAGCCCACCGAAGTCCCGGCGGTCTTCGCCGGCTGACCGGTTTGCGCGGCGCGTGAGAGCCGATCCAGACCGGCACGCGGAGCACGCGGCGACGGATCGCCGCCGTGGACGGGCACCTGTCGTCGCGTCAGCCCCGCCGGCAAGCCAAAAGGTGCAGTACTTCTAAACGACTGCGCCTCGGGCAGCAGGGCCGACGTAGCCGGTGCCTGGGTTTCCGAGTGAACTGGGGATGGTGTTGCAACTGAAGGGAAATTGCGCGCAATAACCAT
Protein sequence:
MVIARNFPSVATPSPVHSETQAPATSALLPEAQSFRSTAPFGLPAGLTRRQVPVHGGDPSPRAPRAGLDRLSRAAQTGQPAKTAGTSVGCTDIFNRLKEKFGRHACSPPSDKSLFESSLQYGLVQATGLKTAFGSDKIGSGGVCAGLSTIWMNLHCAAPDGSVNTRLSAVGSFEGMQHALIFQKAYHMNHEHLRRGSGFGRSLETKARADLDGLYGITRDMRPIKSTSSAAKIAATMASIDGYASLIFYRTDKAWKTTGHEMGLHRNPEDGMITFFDPNHGEFRFKSEDAAQFLRTLREKYRLKSDVSFDWALTNVRPNNTGSSTPLDFLVDYVKADQERLSRS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37368.1 | 344 | 9.53 | -0.423 | 40.3 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR038765,IPR006473
Pfam: PF03543
SMART:
KEGG: aaa:Acav_4550
PRINTS: