Effector profile
| PlantPEAD ID: PlantPEAD06967 | Uniprot ID: R1GC35 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 310453 | Pathogen type: Fungi |
| Species: Botryosphaeria parva | Strain: strain UCR-NP2 | Other name: Grapevine canker fungus,Neofusicoccum parvum |
| Gene name: | NCBI Gene ID: KB916545 | |
| Entry name: R1GC35_BOTPV | Protein name: Putative allergen v5 tpx-1-related protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGCTCATTCGCTCTGATCGTGGCCTCGCTGGCCGTCCAGACTCTGGCCTCTCCCTTCGTTAAGCGCCAACCCGCATGCTCCGCGCCCGGAGGTTCCTATGCTATCGCCCAACCGACGGATCCCAATGCCAAGATGTGGCTCGCACTGCACAATGCCCACCGTGCCAACCACACCGACACCTGCGCAATGCTCTGGGACCCCGAGCTCGCACAAATTGCGCAGCAGTCTGCCCAGAGGTGCCAGTTTGCACACGACATCCACGGAGACTACGGACAGAACATTGCCGAGGGCTATAGCAGTGGTCCCCAGGGCATCATTTCAGCTGCTGCACAGGCAACGGGAATGTGGTACAATGAGATCGAGCACTTCAGCTCTTACTGGGGCGCGTCCGATGTGCCCATGACCGAGCCCAGCGTTCTCCACTTCACCCAGATGGTTTGGAAGGAGACATATGCTGTTGGATGCGCCATTGCAGAGTGCGGCAGCATGCTGATGTCCTTCTGCAACTACCGCTCCGCAGGAAACTTCGCTGGCAACTATGCGCCCAATGTCGCCCAGGTCGTCCCGAACCCTCTGCCTCCGATCTGCTCCGAGACCGGATCTTTTGGAGGTGGCTGCATGGCCGACCCCCAGATTGAGCAGAGTTACGTCTTCTAG
Protein sequence:
MRSFALIVASLAVQTLASPFVKRQPACSAPGGSYAIAQPTDPNAKMWLALHNAHRANHTDTCAMLWDPELAQIAQQSAQRCQFAHDIHGDYGQNIAEGYSSGPQGIISAAAQATGMWYNEIEHFSSYWGASDVPMTEPSVLHFTQMVWKETYAVGCAIAECGSMLMSFCNYRSAGNFAGNYAPNVAQVVPNPLPPICSETGSFGGGCMADPQIEQSYVF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23565.5 | 219 | 5.17 | -0.077 | 52.72 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR014044,IPR035940,IPR001283,IPR002413
Pfam: PF00188
SMART: SM00198
KEGG: npa:UCRNP2_7495
PRINTS: PR00838,PR00837