Effector profile
| PlantPEAD ID: PlantPEAD07207 | Uniprot ID: A0A163AQJ6 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5454 | Pathogen type: Fungi |
| Species: Ascochyta rabiei | Strain: ArDII | Other name: Didymella rabiei，Mycosphaerella rabiei |
| Gene name: | NCBI Gene ID: JYNV01000247 | |
| Entry name: A0A163AQJ6_DIDRA | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGAAATTTTGCATACTGTAGTGCCCGGTCTGGAACACAAGGCTGGCCTGATCTTCAACTCGACCATGGTGACATGGTTAGGAGCCGTCTGCTCTGCGCTTGAAGTTGGCAAGGAGTACTGCGTTGAGTGGTCTGGCACACCGCCTGCGTTGCCCAAATCGCCAAAGACATCATCCACACCAACCCCAACACCGACCCCAGCTCCCACTACTTTATCGACGGTGACCAGCACCAAAATCACTACCATCGCTCCAGTTGCAACTTGTGCCTCTACACCTGCTGGTGTCGTTACACCCTCTCCCATCCAGCTCTGCACTTTCGATCTTAAGAAGGGTGAGTACGTCTGCCCGACAGCACCCCCTACAGCAACCCCCACTTCAGTCAAGAACCCTGCTCCCGGCCCAACGCAAGAGGGTATTAATGCTAAGTGCAACAAGTGGGTCCTTCAGAAGACTGGCGTGTACTGCTTTGATATGGCCAAAGCAGCTAGTGTTGCGCTGGACAGGCTGTATACGCTGAACCCTGCTCTTAAGGGAGACTGCAGTGGTCTCTGGCCTGGATATGCTTACTGTATCGGTACATTGTGA
Protein sequence:
MEILHTVVPGLEHKAGLIFNSTMVTWLGAVCSALEVGKEYCVEWSGTPPALPKSPKTSSTPTPTPTPAPTTLSTVTSTKITTIAPVATCASTPAGVVTPSPIQLCTFDLKKGEYVCPTAPPTATPTSVKNPAPGPTQEGINAKCNKWVLQKTGVYCFDMAKAASVALDRLYTLNPALKGDCSGLWPGYAYCIGTL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20356.6 | 195 | 8.35 | 0.073 | 33.05 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam:
SMART:
KEGG:
PRINTS: