Effector profile
| PlantPEAD ID: PlantPEAD07275 | Uniprot ID: H1UX98 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 759273 | Pathogen type: Fungi |
| Species: Colletotrichum higginsianum | Strain: strain IMI 349063 | Other name: Crucifer anthracnose fungus |
| Gene name: | NCBI Gene ID: CACQ02000474 | |
| Entry name: H1UX98_COLHI | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGACAGAAGTACATCTATCGAATGGAGAGCTCTTTGATGCCATAGTCATCGGGGGCGCCGCGACGCCGCCTACCACGACGACGACCAAGCCTCCCGTCACCACCACGGCCCCCGGCAACGGTGTGGCCACGCCCCAGCCCACGCAGCCCGGAATGGTGAACAACTGCAAGAAGTTCCACTACGTGTCCGAGGGCAACACTTGCGGCCAGATCATCAGCTACAACGGCATCACCCTCGCCAACTTTGTCAAGTGGAATTCGGGCGTGGGCGCCACCTGTCAAAACATGCGGGCCAAGACCTATGTCTGCGTCAGTGTTTGA
Protein sequence:
MTEVHLSNGELFDAIVIGGAATPPTTTTTKPPVTTTAPGNGVATPQPTQPGMVNNCKKFHYVSEGNTCGQIISYNGITLANFVKWNSGVGATCQNMRAKTYVCVSV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 11076.6 | 106 | 8.42 | -0.08 | 15.93 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam:
SMART:
KEGG:
PRINTS: