Effector profile
PlantPEAD ID: PlantPEAD07279 Uniprot ID: H1VNE1 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 759273 Pathogen type: Fungi
Species: Colletotrichum higginsianum Strain: strain IMI 349063 Other name: Crucifer anthracnose fungus
Gene name: NCBI Gene ID: CACQ02004903
Entry name: H1VNE1_COLHI Protein name: LysM domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
GCAGACGAAGACGTCCGCCTGGAGGCCCGTACAGTCCGTCTTGACGGCCGGGTTCCACGAGTAGAAACTCTCAAGGGGAACACCGTTGGCGTCAGCGATGGCCCAACATCCGTCGCCAGGCTGGACCTTGTAAAAGTCGCCGCAGCCGTTGACCATGCCTTGTTGCGTGGGTGTGGGGGTCGCTGGCGAAGCATCGCCTGCTGTCGTCGTCGTCGTCATTGGCGGAAGCTGGGTCACGGACACGCCCACGCAAACGTAAACGTCGGCCTGTAGACCAGAGCAATCAGTCTTGATAGCGGGATTCCACGAGTAGAAATCTTCAAGGGGAATTTTGTTGTCGTCAGCGATGGCCCAACACCCATCGCCGCTGACTACCTTGTAGAACTTGTTGCAGTTGGAGATCATTCCCGGTTGCACGGGCGTCGGGGTGGCGATGCCTGTCGGAGAGCTGGGAACGGTGGTGGTTGACGGGGGAGGCTGGTAGTCGGTGGCGCCCGGGGGGGAACCGTCAGCTTCGGTTGAGATGCAGTAGTGTGTCCCGATGACCATGCCCGAGCAGTCGCTCTTGACGGATGGGTTGAAGGTGAAGAACTGATCGACGGTCAGGCCGATTCTGCCGAGGACTACCGCGCACGACTCGCCAGATTCCGCTGAGTACCACGTTGTGCAGTTGGCCAT
Protein sequence:
MANCTTWYSAESGESCAVVLGRIGLTVDQFFTFNPSVKSDCSGMVIGTHYCISTEADGSPPGATDYQPPPSTTTVPSSPTGIATPTPVQPGMISNCNKFYKVVSGDGCWAIADDNKIPLEDFYSWNPAIKTDCSGLQADVYVCVGVSVTQLPPMTTTTTAGDASPATPTPTQQGMVNGCGDFYKVQPGDGCWAIADANGVPLESFYSWNPAVKTDCTGLQADVFVC
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
23675.5 226 4.03 -0.069 43.39
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.